Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu2g2502 | ATGGCGGATGCGGAGCCAGTAAGCGGAAGGCGAAGGCCCCGGGGACCGGAGGCCACCCCCCGGAGCGAAGCCTTGGAGCGCCTGAAGGCCCGCCTCCGCGGCGGTCGTCGATCCGACGGCACCGGGCCCCAAATCAGGTTAGAAAACCCTATCTACGACACCGTCCCCGAGGACGAGTACAACGCCCTCGTCGCCGAGCGCCGCGAGCAGGCGCGCTCCTTCATCGTCGACGATGAAGGACTCGGCTACGGCGACGAGGGCGAGGAAGAGGACTGGTCGCAGGCCGGGTTCACCCTCTCCTCCGACGAATCCGAAGGCGAATCGGAGAGGCCGAAACGGAAGAAGGTCGAGAAGAAGGACCCCCAGCCGAAACGACACTCTTCTTCGCTCTCCGCCGCCGCGGCCATGATGGGCCGCCAGAGGCTCTCCTCCATGTTCACTTCCTCCGTTTTCAAGAAGAGCAGAGACGACAAGGCCTGCGACAGCATCGTTGATGATGTTATCGCGGAAAGGGCGCAAAAGCAAACGAATCCCTCTTCTGTCTCAGACGATGCTTTGCATAAGCCTTCTGTTGATTTGATCGGAGCTGCATCGTTGCCGGCAGATGATAATATTGAGTCTATTAAGGTTGTCGTTGAGAGTAACGACTTGGACTCGGGGTTAGAGCAAAATTGCGAGGTGGTTAGTGAAATTGAAGAGAGGGCACCAATGGTGGGATCGGATGATTGTAAGATTAATGAGGGTTTGGTTGAGGAGAAAGAGGtgaagaattttgaaattgaagtaAAAGAGGGTGCGAAAAAGGAGGTGTTCACTTTGAATGCCAAGGTTAAAGAAGAGGAGGATCCGGCATTGTCTGCGACTGCTGGTTGGAAGGAAGCGATAAGTGGTGCCGGTGGGATCGATGTTGCTGATTCGAAGGATGCTTTGAAGAACCAACAACAGGCAGAGTTTGATTTGGAGGAAGATGGGTCACTGCCTTTCTATATATTAGATGCCTACGAGGAGTTTTATGGAGAAAATAGGGGCACCCTTTATCTCTTTGGGAAGGTCAAAGCAGGGGATTTGTATCAGAGTTGCTGTGTTATTGTGAAGAACATGCAGAGGTGTGTCTATGCAATTCCAAGCCGTCCTTTGCATCGCACCGAAGAGATGATGAGTCTAGAGAGAGATGTCCAAGAGTCTCGCATTTCTTCTGCAGATTTCTTTAAAAAGCTGCAAGATGCGGTATCTGatgttaagaatgagatagcaCAACATCTGGTGAATTTGGAAGTTTCCAACTTTAGCATGGCGCCTGTTAAGAGGAAATACGCATTTGAACAATCTGAAATTCCTGCAGGCAAAAATTATGTGGtgaaaatcaattattcatTCAAGGATCCAGTACTTCCAGTAGATCTCAAAGGAGAAAGTTTTTGTGCTCTCTTAGGAAGTGGTTGCAGTGCGCTCGAGCTTTTTctgattaaaagaaagataaagggGCCTTCATGGCTAAAGATTTCAAAGTTTTCTACAAGCTCAGCTTCTCGAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGCTGACTCTCCTAAAAACATAAGGAGTTCAACACCTTCAAAAATCACTTCTAATATTCCTCCTGTGGTTGTTGCAGCGATAAACTTGAAAACCACCATAAATGAAAAACAGAACGCGAATGAGATTGTATCAGCATCCGTTATCTGTTGCAACATGGTTAAGATTGACACTCCTATGTTGGCTTCAGAGTGGAAGAGACCTGGAAGGCTGACCCATTTTACTGTTATTCGTAAACTTGATGGGAATATATTTCCAATGGGATTCAATAAGGAGGTTACGGACAAAAACTTAAAAGCTGGTTCAAATGTTCTGTGTGCTGAAAGCAGTGAAAGAGCTTTGTTAAACCGCTTGATGTTAGAATTACACAAGTTGGATTGCGATGTTCTTGTTGGACATAATATTTCTGGATTTGACCTGGATGTTCTTCTACACAGATCCCAGGCTTGCAAAGTAGCAAGCAGCATGTGGTCTAAACTAGGCCGCCTCAACCGTTCTACAATGCCTAAACTTGGAAGAAGAAGCAGCAAGGTTTTTGGTTCTGGAGCAGATCCTGGTATCATGTCTTGCATTGCTGGCCGGCTTCTTTGTGATACATACTTGTGTTCCCGTGACCTATTAAAGGAGGTTAGTTATTCTTTAACTCACCTTGCAAAATCACATCTGAACAAGTTTCGGAAGGAAGTTGCTCCACATGAAGTTCCCAAAATGTTCCAAACAGCAGAATCCCTAAAGGAGCTTATTGAATACGGTGAAACGGATGCATGGTTGTCTATGGAACTCatgttttatttaagtattCTTCCACTCACACGTCAATTGACTAATATAAGTGGTAATCTGTGGGGAAAAACTCTTCAGGGTGGTCGAGCACAGAGAGTGGAGTATCTTTTGCTGCATACTTTCCATGCAATGAAATATATGGTGCCAGACAAGTTCTCAAACCatgcaaaagaaacaaaattgacaAAACGCAGATTAACTCATGTTGTTGAGGATAGCAACTTTGATGTAGATATTGATGATGCAAACTATGACAATGATGCTTCCGAAGCTGATCATAAGAAAAGCAAAAAGGGTCCTTCTTATGCCGGGGGGCTGGTTTTGGAGCCCAAGAAGGGTCTATATGACAAGTATATATTGCTTCTGGACTTCAACAGTCTTTATCCTTCTATTATTCAGGAATACAATATCTGCTTCACAACAGTTGAAAGATCTTTGGATGGATCTTTTCCTCGTCTACCATCTAGTAAAACAACTGGAGTCTTGCCAGAGGTGCTGAAAAATCTGGTTGATCGGAGGAAAAAGGTAAAGTCGTggataaagaatgaaaaaaagaagaatgaaaaagctgaTCCTATTAGAGTTCAGCAACTGGATATTCAGCAGCAAGCACTGAAGCTTACTGCAAACagTATGTATGGGTGCCTGGGATTTTCCAATTCAAGATTTTATGCTAAGCCGTTAGCTGAGCTCATAACTCTACAAGGAAGGGAGATACTGCAGAGTACTGTTGATCTTGTTcagaataatttgaatttagagGTGATCTATGGCGATActgattcaataatgatttaCAGTGGGCTAGATGATATTGAGGAAGCAAATAAAATTGCTGTAAGAGTTATTCAAGAGGTCAATAAGAAATATACATGCTTGGAAATTGATCTTGATGGTTTATATAAAAGGATGCTGCTACTTAAGAAAAAGAAGTATGCAGCCGTAAAGTTGCTGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGTAAAGGTCTTGACATTGTTCGTCGTGACTGGAGCTTATTAGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGTGAAGATGTCGTGGAGTCAATCCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTATCATTAGAGAAATATGTCATTACGAAGACATTGACTAAACCTCCTGAAGCTTATCCTGATGCCAAGAACCAGCCGCATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACTCTTCTGGTTGCTCTGTTGGTGATACAATCCCTTATATAATTTGCTACGAGCAGGGCGGTAGTTCAGGCAGTGCAGCCGGCATTGCACAGCGTGCCAGACATCCTGATGAACTTAAACGAGAACAAGGGACATGGCTGATTGACATTGATTACTATTTATCACAACAGATCCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGTACAAGCCCAGAAAGACTGGCTGATTGTTTAGGGCTTGACTCGTCAAAGTTTCATCATAAATCAAGTGAAGCTTTAAATGATGATTCTACAAGCACACTCCTGTTTGTTGCTGATGATGAGGAGAGGTATCGGGGATGTGAGCCGTTGGGCTTGTCATGCCCCAGCTGCTCTGGTACATTTGACTGCCCACCCGTCTTTAAAtctatttgttgtttgttgggAAGTGAAAGGCCAACCAGCACAGCCCCAGAGGAATCTGACTACAATTTCTGGCGTAAGCTGTGCTGTCCTAAATGCCCAGAAGATGTTACAATTTCTCCTGCAATGATAGCTAATCAGGTCAAAAGGCAAGCAGAGAGGTTTGTTTTAATGTACTATAGAGGTTTACTAATGTGTGATGATGAAACGTGTAAGCATACAACACGGAGTATCAGCCATCGGTTGGTTGGTGATTCTGAGAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAATGGTCGTCTGCTTAGAAAGtACACTGAAGCAGATTTGTACAGGCAGCTCTCGTATTTTTGCCATGTGTTCGATACTGTTTCTTGTATAGAAAAGATGGAGGCAAAATCTAGAGTACCGATAGAGAAAGAGTTGATCAAAATTAGGCCGATGATTGATCTGGCAGCATCAACAGCACAGAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAGACTGCAGGATCTGGTCATTACAGTTTAA | 4554 | 0.4291 | MADAEPVSGRRRPRGPEATPRSEALERLKARLRGGRRSDGTGPQIRLENPIYDTVPEDEYNALVAERREQARSFIVDDEGLGYGDEGEEEDWSQAGFTLSSDESEGESERPKRKKVEKKDPQPKRHSSSLSAAAAMMGRQRLSSMFTSSVFKKSRDDKACDSIVDDVIAERAQKQTNPSSVSDDALHKPSVDLIGAASLPADDNIESIKVVVESNDLDSGLEQNCEVVSEIEERAPMVGSDDCKINEGLVEEKEVKNFEIEVKEGAKKEVFTLNAKVKEEEDPALSATAGWKEAISGAGGIDVADSKDALKNQQQAEFDLEEDGSLPFYILDAYEEFYGENRGTLYLFGKVKAGDLYQSCCVIVKNMQRCVYAIPSRPLHRTEEMMSLERDVQESRISSADFFKKLQDAVSDVKNEIAQHLVNLEVSNFSMAPVKRKYAFEQSEIPAGKNYVVKINYSFKDPVLPVDLKGESFCALLGSGCSALELFLIKRKIKGPSWLKISKFSTSSASRRVSWCKFEVTADSPKNIRSSTPSKITSNIPPVVVAAINLKTTINEKQNANEIVSASVICCNMVKIDTPMLASEWKRPGRLTHFTVIRKLDGNIFPMGFNKEVTDKNLKAGSNVLCAESSERALLNRLMLELHKLDCDVLVGHNISGFDLDVLLHRSQACKVASSMWSKLGRLNRSTMPKLGRRSSKVFGSGADPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTHLAKSHLNKFRKEVAPHEVPKMFQTAESLKELIEYGETDAWLSMELMFYLSILPLTRQLTNISGNLWGKTLQGGRAQRVEYLLLHTFHAMKYMVPDKFSNHAKETKLTKRRLTHVVEDSNFDVDIDDANYDNDASEADHKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSLDGSFPRLPSSKTTGVLPEVLKNLVDRRKKVKSWIKNEKKKNEKADPIRVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIEEANKIAVRVIQEVNKKYTCLEIDLDGLYKRMLLLKKKKYAAVKLLFKDGTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVSLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSAAGIAQRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFHHKSSEALNDDSTSTLLFVADDEERYRGCEPLGLSCPSCSGTFDCPPVFKSICCLLGSERPTSTAPEESDYNFWRKLCCPKCPEDVTISPAMIANQVKRQAERFVLMYYRGLLMCDDETCKHTTRSISHRLVGDSERGTVCPNYPRCNGRLLRKYTEADLYRQLSYFCHVFDTVSCIEKMEAKSRVPIEKELIKIRPMIDLAASTAQKIRDRCAFGWVRLQDLVITV | 1517 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu2g2502 | 1517 | TIGRFAM | pol2: DNA polymerase (pol2) | 51 | 1268 | - | - | |
| Ssu2g2502 | 1517 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Ssu2g2502 | 1517 | Gene3D | - | 328 | 527 | - | - | |
| Ssu2g2502 | 1517 | Gene3D | - | 1114 | 1301 | IPR042087 | - | |
| Ssu2g2502 | 1517 | SUPERFAMILY | DNA/RNA polymerases | 875 | 1286 | IPR043502 | - | |
| Ssu2g2502 | 1517 | CDD | DNA_polB_alpha_exo | 541 | 793 | - | - | |
| Ssu2g2502 | 1517 | Gene3D | Helix hairpin bin | 946 | 996 | - | - | |
| Ssu2g2502 | 1517 | CDD | POLBc_alpha | 876 | 1286 | IPR045846 | GO:0003887|GO:1902975 | |
| Ssu2g2502 | 1517 | PRINTS | DNA-directed DNA-polymerase family B signature | 983 | 995 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Ssu2g2502 | 1517 | PRINTS | DNA-directed DNA-polymerase family B signature | 900 | 913 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 |
Showing 1 to 10 of 28 entries
Duplication type information
Functional genes information
Pathway information