Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2483 ATGGCGATCGATAGCGTTTATGCTTCGTCTCCACCGTTTCAGACCGGACCGTCCGGCCACCCGCGCCATTTCTACCTCGCGGTCGACAGGCTTCAATTCAAAATGCAAACGGTGGTTGAACTTGTGGATCTGGTGGCTCGACGTCCATGCTTGCCCATCGTGGTGTGCTGCAGCACGCGCGACGACCTCGACTCTCTCTGCTCCTCTCTCTCCGCTCTCCCCTTCGTTTCCTCTTCTGCTTTGTACAGTGACCTTGCTGAAGATGAACGTGCTTTTGTTTTAGAGAAATTTCGACAGGTAGCAGCGAGGTGGAACCAGATGAATCACGGTGGAACGCCAAACGAAGATGAGGCGGGGAAAGATGAGAGATCTCATATGATAATTGTAACAGACGCTTGCCTCCCTCTCCTTGCTTCTGGGGAACTTCCCTTGAATGCTCATCTTCTCATTAACTATGAATTACCGGCAAAGAAGGAGACATATGGAAGACGTTCGGCGACTTGTTTAACAGCTGATGGAATTGTCATTAATATGGTTGTTGGTGGGGAAGTGGTAACTCTAAAAAGTATTGAAGAAAGCAGCAATATTGTCATGCAAGAGATGCCTATGCAAATTCTTGACATTTTATGA 630 0.4825 MAIDSVYASSPPFQTGPSGHPRHFYLAVDRLQFKMQTVVELVDLVARRPCLPIVVCCSTRDDLDSLCSSLSALPFVSSSALYSDLAEDERAFVLEKFRQVAARWNQMNHGGTPNEDEAGKDERSHMIIVTDACLPLLASGELPLNAHLLINYELPAKKETYGRRSATCLTADGIVINMVVGGEVVTLKSIEESSNIVMQEMPMQILDIL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2483 209 PANTHER RNA HELICASE 3 206 - -
Ssu2g2483 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 207 IPR027417 -
Ssu2g2483 209 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 3 206 - -
Ssu2g2483 209 Gene3D - 20 209 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2483 22 209 Eukaryotic Initiation Factors Gene Family AT3G19760 24.737 6.46e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2483 - K03257 gmx:100791017 374.4