Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2463 ATGCGTTGGTTCCCCACCCTCCTCTTCTCCAACTCTCATTCTCATTCGTCATCGTCATCGTCATCgacatcttcatcatcatcatcatcatcatcttcggCGACTCTGAAGTCTTCCCCTTCCACCTCCTCTTTTCCCGACCCCAGGAAGAACACGCGTTCCGCCTGGTTCTTCGGCAGCGGCAAAAGGTCCACGCGCAGCCGCATGTTCCGCCACGTCTCCGACTTAGACGCCGTCGTCGTCCCCTTGTCTCGGTCGTCGAGCGCCTTTGATCACTCCTCTACCTCCTCCGTCGAGCCTCAGCCCTTGCCCTTGCCCAGAGACGCCGACTACCGTTTTCCCTCCCCCAAAGATGCCGCCGACACACCTGTCGCCGCCGTCGACGTCACCCTCACGGCTGGTTTTCGAATGCGCAGTGTTTTTGAAAGCCAagatacaagaaaaaatatggaGCACGTGGTGCCTCAAGACGCGAGCGGTGGTGCAAGTGCAAGCACTCAAGGAGATAACTTGTGGGCGGGCGTCCCTGCTAGAAGTGCTCCAACTAGTCCTTTTGCCAGTCCCAGACTGAGCCCAAAGAATACCAAAAGCGATGATTTCGTACCGTACTATTACATGGCACCCAAAGGGAATCAGTTCTGGTCAGCACCGGAGATGCCCTTATCCGACCCTTCCCCTTCAGCTGGGCACCCGCCTCCTGCTTTCTATGATTTGTCGGCATTGCGCATTGCTGATAACGCTCTTTCTCCCCATCAAAGTCCACGGGGAAAAAGCCCCACCCAACACCCCAAAAGCCCAACTGGGCCTTCTTCTTCATCCATTCCCCGCAGGTTATCCCTCGACACCTCAACGGCACGTCGCGAAACTCTCACCGTCCACCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGTGGCTCCCTTGCCTTCACCATCTGCTACCTTCTCCCAACCCAAGACAGAATCCTTGCCAATGAAAAACCAGTGGCAAAAAGGGAAACTTATTGGTCGAGGTACTTTTGGAACTGTTTATGTTGCCACCAATAGAAAAACTGGGGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCTGAGTGCATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTATGGTAGCGAAATAGTAGAAGACaggttttatatttatttggaaTATGTCCATCCGGGTTCAATGAATAAATACGTTCGTGAGCATTGCGGTGCAATAACAGAATGTGTTGTTCGGAGTTTCACGCGCCATATTCTTTCGGGGTTGGCTTACTTGCATGGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTAACTGGACATGTTACAGATCTTTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTTTGCAAGCGGTTGTGCAAAAAGACAACAGCTCTGATCTAGCTTTTGCTGTTGATATTTGGAGTTTGGGCTGTACAATTATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAGGGATACCCCTCCTATTCCAGAAGCATTGTCAGCTGAGGGTAAAGATTTCCTGAGGCTTTGCTTTATAAGAAATCCAGCGGAGCGGCCCACTGCTTCAATGTTACTAGATCATCGATTCCTGAAAAATTTACAACAGCCAGATGTTTCATCTTCCACGCAGCTGTATAATGGAACAATCTTGATGGATACCTATAGTCCCAGAGAGTTATCTGAAAATAAACCTGATCAGATTTCTATTCCCAGTGCACAGATTGCTAAAGGAAAATTAGCCACTGAGAGGTTCTTTCCCGGGGTTATCATTGAGGCCCCTGTAAGTAACAAGCTTGTTCATTATGAAGTTTACAGCATGGGAATCTAG 2004 0.4746 MRWFPTLLFSNSHSHSSSSSSSTSSSSSSSSSSATLKSSPSTSSFPDPRKNTRSAWFFGSGKRSTRSRMFRHVSDLDAVVVPLSRSSSAFDHSSTSSVEPQPLPLPRDADYRFPSPKDAADTPVAAVDVTLTAGFRMRSVFESQDTRKNMEHVVPQDASGGASASTQGDNLWAGVPARSAPTSPFASPRLSPKNTKSDDFVPYYYMAPKGNQFWSAPEMPLSDPSPSAGHPPPAFYDLSALRIADNALSPHQSPRGKSPTQHPKSPTGPSSSSIPRRLSLDTSTARRETLTVHPLPLPPWAGPVAPLPSPSATFSQPKTESLPMKNQWQKGKLIGRGTFGTVYVATNRKTGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRSFTRHILSGLAYLHGKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVTDLSLKGSPYWMAPELLQAVVQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPEALSAEGKDFLRLCFIRNPAERPTASMLLDHRFLKNLQQPDVSSSTQLYNGTILMDTYSPRELSENKPDQISIPSAQIAKGKLATERFFPGVIIEAPVSNKLVHYEVYSMGI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2463 667 MobiDBLite consensus disorder prediction 155 193 - -
Ssu2g2463 667 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Ssu2g2463 667 Pfam Protein kinase domain 329 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2463 667 SUPERFAMILY Protein kinase-like (PK-like) 316 616 IPR011009 -
Ssu2g2463 667 Gene3D Transferase(Phosphotransferase) domain 1 324 622 - -
Ssu2g2463 667 ProSiteProfiles Protein kinase domain profile. 328 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2463 667 MobiDBLite consensus disorder prediction 251 278 - -
Ssu2g2463 667 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 635 - -
Ssu2g2463 667 MobiDBLite consensus disorder prediction 1 56 - -
Ssu2g2463 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 635 - -
Ssu2g2463 667 MobiDBLite consensus disorder prediction 248 278 - -
Ssu2g2463 667 MobiDBLite consensus disorder prediction 7 50 - -
Ssu2g2463 667 MobiDBLite consensus disorder prediction 291 322 - -
Ssu2g2463 667 SMART serkin_6 328 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2463 Ssu-Chr2 83135713 83140675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2463 36 644 MAP Kinase Kinase Kinase AT5G66850 52.687 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu2g2463 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2463 - - gmx:100793654 969.148