Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2460 ATGGCCCAAGATCACAGTGGGGATAAATCAAAGGGAAACATGTCACAGTCTGGTTCTCCACAAGGTCCTCTTACACCTCTCCTCCTTAGAGGGTCTGTTAAGGGCCTCTCAAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCCGGAATTGGAAAGCAGGGATCCACCAGTAG 189 0.5079 MAQDHSGDKSKGNMSQSGSPQGPLTPLLLRGSVKGLSSPGRNSVDAEDEQSDCRNWKAGIHQ 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2460 62 MobiDBLite consensus disorder prediction 1 62 - -
Ssu2g2460 62 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 59 IPR044787 GO:0003700|GO:0006355
Ssu2g2460 62 MobiDBLite consensus disorder prediction 1 23 - -
Ssu2g2460 62 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 59 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2460 - - pvu:PHAVU_002G021400g 108.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2460 2 83053439 83053627 Ssu5g1559 5 48615686 48616226 PCT