Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2447 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAGCAACCGCAACCGCAGCAGCCGTCTCCTTTCCAGCCACAGCAAAGTAGTTTGTTCCTTccgcagcagcagcagcaacagCAACAATTTCAACCGcaacagcagcagcagcagccgCAACAGCAGTTGTTTTTGTTCACTAACGATAGAACTCCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGATTCTTCTTCTGATCGAGGAGCGGATATTGGAGTATAGGGATGAAGGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCGGTTTCCAACGATGGATTTGAGCTTGATGCAGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAACGACAGAAAACATTGCTACAGGAACTGATGTCCACTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCTAGGTTCCTTCATCCCACTGGGGGTACATCAAGTGCCACTGCCCCATCACAGACTCCTGGAACAACTATAGCAGCTAGTTCGAGTAGCCAACCAACAACTGCCTCTATACTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCGCTGTTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGTGAGTGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAGAAATGCTTCCAGTAATGCATCTTCATTACTGCAATCTCTTCCCAAGGTCATGACAAATGTGCACGACTTTTTTGTTCACGTAGCTGCAAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGTCGCCGGGGGGAGGTGAATGATCCATTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAATTCATCCAACATTGCATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTATTTTCTAGTTCAGGTACTCAAGCAGCATTGACTGCTCCACAGATATCTGCAGCAACTTCATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAGCACGCCATCTTCTGCTCCATCGTCTTCTATGTTGTCATCTCTGTTTACAACACCATCAACTCCTGCTCCAGGACCTCAAACGTCACTTTTTGGATCTGTACCTGGTCCAGCATCAACTCCCTCTCTGTTTGGTAATACTACTCCATTGTTTAGTACGACTCCGGCTACACATTCCCTCTTTTCAACTCCATTTGTTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATcgAAAAATCCACGGGCGAAATCCAGAACTGCTCGACGCTAA 1413 0.4416 MSFSLFATPQQQQPQPQQPSPFQPQQSSLFLPQQQQQQQQFQPQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLLIEERILEYRDEGQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPTGGTSSATAPSQTPGTTIAASSSSQPTTASILPVFDFYSGLPKKPSLFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNASSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRIHPTLHLPANPQPSTQVAGLFSSSGTQAALTAPQISAATSSLSSGSGFSLFSTPSSAPSSSMLSSLFTTPSTPAPGPQTSLFGSVPGPASTPSLFGNTTPLFSTTPATHSLFSTPFVSGAATGSGASFGPGSKNPRAKSRTARR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2447 470 MobiDBLite consensus disorder prediction 1 51 - -
Ssu2g2447 470 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 442 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Ssu2g2447 470 MobiDBLite consensus disorder prediction 447 470 - -
Ssu2g2447 470 Gene3D - 214 304 - -
Ssu2g2447 470 Coils Coil 132 152 - -
Ssu2g2447 470 MobiDBLite consensus disorder prediction 387 413 - -
Ssu2g2447 470 MobiDBLite consensus disorder prediction 307 326 - -
Ssu2g2447 470 MobiDBLite consensus disorder prediction 171 193 - -
Ssu2g2447 470 MobiDBLite consensus disorder prediction 22 51 - -
Ssu2g2447 470 MobiDBLite consensus disorder prediction 307 341 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2447 54 470 NAC Transcription Factor Family AT4G37130 63.573 3.45e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2447 K14307 - gmx:100776992 698.738