Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2444 ATGAAGCAGTGGTTTGGGGATTTAACGCATAATATTGTTTTGAGAATGGTGAGAGGGAGGCCATACAGTGATGATTATCCTGAAGGTGAAGCAAGAAGGTACAAGAAAGTTATGAGAGACTGCATGAGTTTGTTTGGGGTGTTCGTGTTATCTGATGCTATTCCATTTCTGGGGTGGTTGGACATGAACGGATATGAAAAGGCCATGAAGAGAACTGCAAGTGAATTGGACCCTCTGGTTGAAGGGTGGCTAGAGGaacacaaaaggaaaagagCTTCGAGTATGATTGGAAAGGAAGAACAGGATTTCATGGACGTCATGTTGAATGTTCTGCAGGATGCACAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCTACTTGTTTGAATCTGATTTTAGCAGGAAGTGACACCACCATGATTACTCTAATATGGGTGCTATCTCTGCTACTCAACCATCAAATGGAACTTAAAAAAGCCCAAGATGAATTGGACAGTTATATTGGGAAGGATAGGAATGTGGAAGAATCTGACATAACGAAGTTGGTCTACCTCCAAGCCATTGTCAAGGAAACTCTGCGCCTGTATCCACCAAGTCCCCTTATCACCCTTCGTGCAGCCATGGAAGACTGCACCTTTTCATGCGGCTATCGCATTCCTGCTGGCACACAGTTAATGGTGAATGCTTGGAAGATCCATCGGGATGGTCGTGTTTGGAGTGACCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAGAACTATGAGCTCGTCCCTTTTGGTTCTGGAAGGCGAGCATGCCCTGGGGCCTCACTGGCTCTGCGTGTGGTGCACTTCACTTTGGCTACATTGTTACACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTAGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCGCTTGAAGTTCTCCTAACCCCACGTCTAGACTCCAAACTTTATGAGGACTAG 1020 0.4402 MKQWFGDLTHNIVLRMVRGRPYSDDYPEGEARRYKKVMRDCMSLFGVFVLSDAIPFLGWLDMNGYEKAMKRTASELDPLVEGWLEEHKRKRASSMIGKEEQDFMDVMLNVLQDAQISGYDSDTIIKATCLNLILAGSDTTMITLIWVLSLLLNHQMELKKAQDELDSYIGKDRNVEESDITKLVYLQAIVKETLRLYPPSPLITLRAAMEDCTFSCGYRIPAGTQLMVNAWKIHRDGRVWSDPHDFKPERFLTSHKDVDVKGQNYELVPFGSGRRACPGASLALRVVHFTLATLLHSFNVASPSNQVVDMTESIGLTNLKATPLEVLLTPRLDSKLYED 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2444 339 PANTHER CYTOCHROME P450 82C3-RELATED 1 337 - -
Ssu2g2444 339 Pfam Cytochrome P450 1 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 229 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 277 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 124 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 144 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 267 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS E-class P450 group I signature 8 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PANTHER CYTOCHROME P450 CYP82D47-LIKE 1 337 - -
Ssu2g2444 339 SUPERFAMILY Cytochrome P450 1 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 270 279 IPR017972 GO:0005506|GO:0016705
Ssu2g2444 339 Coils Coil 151 171 - -
Ssu2g2444 339 Gene3D Cytochrome P450 1 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS P450 superfamily signature 188 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS P450 superfamily signature 277 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS P450 superfamily signature 135 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2444 339 PRINTS P450 superfamily signature 268 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2444 Ssu-Chr2 82765928 82767501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2444 1 337 Cytochrome P450 AT4G31950 52.450 5.20e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2444 - - gmx:606549 627.091