Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2443 ATGGTCATGCTAACATGGGCGCTATCTCTGCTACTCAACCATCAAACGGAACTTAAAAGAGCCCAACACGAACTGGACACTCTTATTGGGAAGGACAGGAAAGTAGAAGAATCTGACATAAAGAAGTTGGTGTACCTCCAAGCTGTTGTGAAGGAAACCCTGCGCCTGTATCCACCAAGTCCCCTTATCACCCTTCGTGCAGCCATGGAAGACTGCACCTTTTCATGCGGCTATCGCATTCCTGCTGGCACACAGTTAATGGTGAATGCTTGGAAGATCCATCGGGATGGTCGTATTTGGAATGACCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAGAACTACGAGCTCGTCCCTTTTAGTTCTGGAAGGCGAGCATGCCCTGGGGCCTCACTGGCTCTGCGTGTCATCCACTTGACCTTGGCTAGACTCTTACACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACAGAGAGCGTTGGACTTACAAATTTAAAAGCAACTCCACTTGAAGTTCTCCTAACTCCACGTCTAGATACCAAACTTCATGAGGACTAG 600 0.4683 MVMLTWALSLLLNHQTELKRAQHELDTLIGKDRKVEESDIKKLVYLQAVVKETLRLYPPSPLITLRAAMEDCTFSCGYRIPAGTQLMVNAWKIHRDGRIWNDPHDFKPERFLTSHKDVDVKGQNYELVPFSSGRRACPGASLALRVIHLTLARLLHSFNVASPSNQVVDMTESVGLTNLKATPLEVLLTPRLDTKLHED 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2443 199 Coils Coil 11 31 - -
Ssu2g2443 199 SUPERFAMILY Cytochrome P450 3 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PANTHER CYTOCHROME P450 82C3-RELATED 1 196 - -
Ssu2g2443 199 PRINTS E-class P450 group I signature 127 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS E-class P450 group I signature 4 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS E-class P450 group I signature 89 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS E-class P450 group I signature 137 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS E-class P450 group I signature 47 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PANTHER CYTOCHROME P450 CYP82D47-LIKE 1 196 - -
Ssu2g2443 199 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 130 139 IPR017972 GO:0005506|GO:0016705
Ssu2g2443 199 Pfam Cytochrome P450 4 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 Gene3D Cytochrome P450 1 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS P450 superfamily signature 13 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS P450 superfamily signature 128 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS P450 superfamily signature 137 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2443 199 PRINTS P450 superfamily signature 48 59 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2443 Ssu-Chr2 82734462 82735061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2443 4 196 Cytochrome P450 AT4G31950 60.309 1.76e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2443 - - gmx:100777753 377.096