Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2416 ATGGAAGCTCAAGCCTGCCTCTTGGTTATtgtcttcttcttgttcttgcTATTGAATTGGCTTGCAAAATATTTCAAGCTAAAACCTAATGTCACTCACAAACTTCCCCCTGGCCCAAAGAAGTTACCTCTCATAGGGAACCTGCATCAACTAGCAGTAGCAGGTTCTCTTCCACATCATGCTCTCCGAGACCTTGCTCATAAATATGGACCTCTCATGCACCTCCAGCTTGGTCAAATTTCTGCAGTTGTTGCATCCTCGCCAAAGATGGCTAAGGAAATAATGAAAACGCATGATCTTGCTTTTGTTCAGAGGCCACAATTTATTTCTGCAGAAATTTTGTCCTATGGGGGAACAGATATTGCTTTTTCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATTTGTGTCAGAGCTTCTAGGTGCCAAGAGAGTTcagtctttctcttttattagaGAAGACGAGACAGCAAAAGTTATAGACTCAATTCGAACATCAGCAGGTTCACCAATCAATCTTACTAGTAAAATTCTCTCATTGATAAGTTCTTCTGTTTCCAGGACAGCATTTGGTAACAAATCTAAGGACCAGGAAGAATTTGTGTCTTTGATTCAAAAAGTAATAGCCTCGGGAGGAGGATTTGACCTTGCTGATTTGTTTCCTTCCATGAAATCCATACATTTCTTAACTGGGAAGAAGGCCAAATTGGAGAAGTTGCAGAAACAAGTTGATAGGGTCTTGGAAAACATTGTCAAGGAGCATCAAGAAAAGCACAAAAGAGCAAAAGAAGAGAGAGTTGAAGTAGAGGACGAAGATCTTGTTGATGTTCTTCTCAGAATCCAACAAAGTGATAGTCTCGACGTCAAAATGACAACTAGGAACGTCAAAGCTTTGATATTGGACGTATTTGCTGCGGGAACTGATACTTCAGCATCAACACTAGAGTGGGCTATGACAGAAATGATGAGAAACCCAAGAGTGAGGGAGAAAGCACAAGCTGAGTTAAGACGAGCATttcaagaaaaggaaataattcaTGAAAGTGATCTAGAGCAACTTACCTATTTGAAGTTGGTGATCAAAGAGACATTAAGGGTACACCCACCTACTCCTTTATTGATCCCTAGAGAATGCTCTGAACTAACCATCATTGATGGGTACGAAATACCTGTCAAAACTAAAGTCATGGTAAATGTATGGGCAATTTGTAGAGATCCCCAATATTGGACTGATGCTGAGAGATTTGTCCCAGAGAGGTTCGATGGTAGTTCTATTGATTTCAAAGGGAATAACTTTGAGTATTTGCCATTTGGGGCTGGAAGAAGAATGTGCCCAGGCATCACATATGGTTTAGCAAGCATTATGCTTCCACTGGCTATGTTACTTTATCACTTCAACTGGGAACTCCCAAATGAGATGAAACCTGAGAGTATAGACATGACTGAACGCTTCGGATTGGCTATTGGGAGGAAAAATGAATTGTGCTTGATTCCCTTTGTTTATGACCATTGA 1518 0.3913 MEAQACLLVIVFFLFLLLNWLAKYFKLKPNVTHKLPPGPKKLPLIGNLHQLAVAGSLPHHALRDLAHKYGPLMHLQLGQISAVVASSPKMAKEIMKTHDLAFVQRPQFISAEILSYGGTDIAFSPYGDYWRQMRKIFVSELLGAKRVQSFSFIREDETAKVIDSIRTSAGSPINLTSKILSLISSSVSRTAFGNKSKDQEEFVSLIQKVIASGGGFDLADLFPSMKSIHFLTGKKAKLEKLQKQVDRVLENIVKEHQEKHKRAKEERVEVEDEDLVDVLLRIQQSDSLDVKMTTRNVKALILDVFAAGTDTSASTLEWAMTEMMRNPRVREKAQAELRRAFQEKEIIHESDLEQLTYLKLVIKETLRVHPPTPLLIPRECSELTIIDGYEIPVKTKVMVNVWAICRDPQYWTDAERFVPERFDGSSIDFKGNNFEYLPFGAGRRMCPGITYGLASIMLPLAMLLYHFNWELPNEMKPESIDMTERFGLAIGRKNELCLIPFVYDH 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2416 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 Coils Coil 231 273 - -
Ssu2g2416 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Ssu2g2416 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PANTHER OS08G0105600 PROTEIN 3 504 - -
Ssu2g2416 505 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2416 505 PANTHER CYTOCHROME P450 71D8 3 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2416 Ssu-Chr2 82138783 82140914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2416 33 500 Cytochrome P450 AT3G26300 46.122 3.56e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2416 - K15472 gmx:100785715 796.964