Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2413 ATGGAAGCTCAAGCCTGCTTCTTGGTTATTGTCTTCTCCTTGTTCTTGCTATTGAATTGGCTTGCAAAATATTTCAAGCTAAAACCTAATGTCACTCACAAACTTCCCCCTGGCCCAAAGAAGCTACCTCTCATAGGGAACCTGCATCAACTAGCAGTAGCAGGTTCTCTTCCACATCATGCTCTCCGAGACCTTGCTCATAAATATGGACCTCTCATGCACCTCCAGCTTGGTCAAATTTCTGCAGTTGTTGCATCCTCCCCAAGGATGGCCAAGGAAATAACGAAAACGCATGATGTTGCTTTTCTGCATAGGCCACAACTTATTTCTACAGATATGTTGTCCTATGGGGGAATAGATATTGTGTTTGCTCCATATGGTGATTACTGgagacaaatgaagaaaatatttgtgtcaGAGTTTCTAAGTGCCAAGAGAGTTCAGTCCTTCTCTTTTATAAGAGAAGACGAGACAGCGAAATTTATAGACTCAATTCGAACATCAGCAGGTTCACCTATCAATCTTactagtaaaattttctttttgataaattcTTCTGTTTCCAGGGCAGCATTTGGTAACAAATCTAAGGACCAGGATGAATTTGTGTCTTTGATTCAAAAAGTGATAGCAGCGGCAGGAGGATTTGACCTTGTTGATTTGTTTCCTTCAATGAAATTCATACATTTCGCAACTCGGAAGAAGGCCAAATTGGAGAAGTTGTACAAGCAGGTAGACAAGGTCTTGGAAAACATTGTCAAAGAGCATCAAGAAAGGCAAATGAAAGCAAAAGAAGAGAGAGTTAAAGTAGAGGATGAAGATCTCGTTGACGTTCTTCTCAGAATCCAACAAAGTGACACTCTCGACATCAAAATGACGACTAGGAACGTCAAAGCTTTGATACTGGTTAGTAAATACCGCAagcatttttctcctttttttcctAGTCAAAGAGTCTCCTTTAATGCCATGGAAACTGAACCATTGTCCGTATGGAGTATTACCTTCATTCTGCTCTTGCTGTTGCCTTGGCTTGCAAAATATTACAAGCCAATATTATCCAGTGTTGCTCACAAACTGCCCCCTGGCCCAAGGAAGTTACCTCTTATAGGGAACCTGCATCAACTAGCACTAGCAGGTTCACTTCCACACCAAGCTCTTCGAGACCTTGCCCACAAATATGGACCTCTCATGCACCTCCAACTTGGTCAAATTTCAGCAGTGGTTGCATCCTCCCCCAGGATGGCCAAGGAAATAATGAAAACCCATGATGTTGCTTTTCTGCAGAGGCCCCTACCTGTTCCGGTTCAAATTCTGACCTATGGGGGAACAGATATTGCTTTTGCTCCATATGGTGAGTACTGGAAACAAATGAGGAAAATATGTATGTTAGAGCTTCTTAGCGCCAAGAAGGTTCAGgctttctcttttattagaGAACATGAAacaagaaaattcatagaatCAATTGAGTCATCCGCGGGTTCACAAATCAACCTTACCAGCAGAATTTACAAGTTGATAAGCGCTTCTGTTTTCAGGGCAGCTTTTGGCAACATGTCCGGGCACCAGGATGAGATTGCGTCTTTGTATAAGCAAGTAGCGGAAGAACTAGGAGGATTTGACCTAGCTGATGTGTTTCCTTCAATGGAGTTTATACGTGTCATAACTGGGAAAAAATCCAAGTTGGAGAAGTTGCGGAAGCGGCTTGATAAGATCTACGATAGCATTGTTACTGAACATCAACAAAAGCGCGGAAGAGTACAAGTAGACAGCGTCGAAGCAGAAGAGGAAGATCTTGTTGATGTTCTTTTGAGAATCCAAGAGAGTGGCAGTCTCGGGATCAACATGACCACCCAAAACATCAAAGCTGTGGTTTCGAATTAA 1887 0.4043 MEAQACFLVIVFSLFLLLNWLAKYFKLKPNVTHKLPPGPKKLPLIGNLHQLAVAGSLPHHALRDLAHKYGPLMHLQLGQISAVVASSPRMAKEITKTHDVAFLHRPQLISTDMLSYGGIDIVFAPYGDYWRQMKKIFVSEFLSAKRVQSFSFIREDETAKFIDSIRTSAGSPINLTSKIFFLINSSVSRAAFGNKSKDQDEFVSLIQKVIAAAGGFDLVDLFPSMKFIHFATRKKAKLEKLYKQVDKVLENIVKEHQERQMKAKEERVKVEDEDLVDVLLRIQQSDTLDIKMTTRNVKALILVSKYRKHFSPFFPSQRVSFNAMETEPLSVWSITFILLLLLPWLAKYYKPILSSVAHKLPPGPRKLPLIGNLHQLALAGSLPHQALRDLAHKYGPLMHLQLGQISAVVASSPRMAKEIMKTHDVAFLQRPLPVPVQILTYGGTDIAFAPYGEYWKQMRKICMLELLSAKKVQAFSFIREHETRKFIESIESSAGSQINLTSRIYKLISASVFRAAFGNMSGHQDEIASLYKQVAEELGGFDLADVFPSMEFIRVITGKKSKLEKLRKRLDKIYDSIVTEHQQKRGRVQVDSVEAEEEDLVDVLLRIQESGSLGINMTTQNIKAVVSN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2413 628 Pfam Cytochrome P450 36 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 Pfam Cytochrome P450 361 627 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 SUPERFAMILY Cytochrome P450 36 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 Gene3D Cytochrome P450 30 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 Gene3D Cytochrome P450 354 628 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 PANTHER CYTOCHROME P450 71D8 331 627 - -
Ssu2g2413 628 Coils Coil 231 274 - -
Ssu2g2413 628 SUPERFAMILY Cytochrome P450 361 626 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2413 628 PANTHER CYTOCHROME P450 71D8 4 302 - -
Ssu2g2413 628 PANTHER OS08G0105600 PROTEIN 331 627 - -
Ssu2g2413 628 PANTHER OS08G0105600 PROTEIN 4 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2413 Ssu-Chr2 81984126 82047060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2413 331 626 Cytochrome P450 AT3G48280 36.824 7.31e-57 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2413 - - gmx:100785715 460.299