Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2397 ATGACCGGCGGCGGGTCGACGGGGAGGTTGCCGACGTGGAAAGAGAGGGAGAACAacaagaggagagagagaagacgGAGAGCGATCGCCGCTAAGATCTACACCGGCCTTCGCGCTCAGGGGAACTACAAGCTTCCCAAGCACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCAGCGAAGCTGGTTGGATCGTGGAAGAAGATGGCACCACTTATCGAAAGGGATGCAAGAGAGGCGCAAGTGAGATTGAAGGCACTCCCCCGAACATAAGCGCGTGTTCTTCGATTCAGCCAAGTCCGCAGTCGTCGTCATTCCCGAGCCCTGTCCCTTCGTATCACGCTAGCCCAACTTCTTCCTCTTTCCCCAGCCCAACTCGCATTGACGCAAACCCTTCTTCCTTTCTCATCCCATTCATCCGCAACATAACGTCCATCCCCGCCAACCTCCCCCCTCTCAGAATCTCCAACAGCGCCCCCGTGACCCCACCCCTTTCCTCGCCCAGAAGCTCGAAGCGCAAAGCGGACTTCGACTCCCTCTCCAACGGCTCCCTCCGCCACCCGCTTTTCGCGACCTCCGCGCCCTCGAGTCCCTCGCGCCGCCACCACGTGGCCACTTCCACCATCCCGGAGTGCGACGAGTCCGATGCCTCCACCGTGGACTCCGGCCGCTGGGTTAGTTTTCAGGTTCAGACAACGACGGCCGCCCCTCCTTCGCCTACCTTTAACCTCATGAAACCCGCGATCGCAGCCCAGGATGTGAACGAGGGCATGCAGTGGGGTTCGGGAGCGGAGAGGGGCAGGGGAGGGTCCGATTTTGACTTCGAGAATGGCAGAGTGAAGCCTTGGGAGGGTGAGAGAATACACGAGGTAGTGGGGATGGATGAGTTGGAGCTTACTCTAGGAAGTGGAAAGGCTTGA 921 0.582 MTGGGSTGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGCKRGASEIEGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRSSKRKADFDSLSNGSLRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSGRWVSFQVQTTTAAPPSPTFNLMKPAIAAQDVNEGMQWGSGAERGRGGSDFDFENGRVKPWEGERIHEVVGMDELELTLGSGKA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2397 306 MobiDBLite consensus disorder prediction 152 169 - -
Ssu2g2397 306 MobiDBLite consensus disorder prediction 84 126 - -
Ssu2g2397 306 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 306 IPR033264 GO:0003700|GO:0006351|GO:0009742
Ssu2g2397 306 MobiDBLite consensus disorder prediction 88 126 - -
Ssu2g2397 306 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 306 - -
Ssu2g2397 306 MobiDBLite consensus disorder prediction 152 220 - -
Ssu2g2397 306 Pfam BES1/BZR1 plant transcription factor, N-terminal 7 130 IPR008540 -
Ssu2g2397 306 MobiDBLite consensus disorder prediction 185 204 - -
Ssu2g2397 306 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2397 Ssu-Chr2 81749862 81750881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2397 9 306 BZR Transcription Factor Family AT1G75080 57.994 2.95e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Ssu2g2397 BES1_N 8.1e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2397 K14503 - gmx:100795837 471.47