Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2371 ATGAAGGTTGAAGTTGAAATAATCTCCAAAGAACTCGTCAAACCCTCCTCTCCCACCCCCAATCACCTTCGCCATTACAACCTCTCCTTGCTCGACCACCTCACACCCCAACTCAACAACTCCATGGTCTACTTCTTCGCTGCCAATAATGTTTCAGACCAGTTCATAAACGCTTCCCACCACCTCAAGAAATCCCTCTCAAAAGCCTTGACCCATTACTACCCTCTAGCGGGAAGACTCGTGGACAAGGCTTTCATAGAGTGCAACGACGAGGGTGCCCTCTACTTGGAAGCAAGAGTGAGATGCAACCTCAACGATCTTGTGGATAGTCCTATCCCCAGCGAGGTTAGCAAGTTGTTACCGTTTGGAATGGATGACATCGTTGACACACCCCTTGGCGTCCAACTCGACATCTTTGATTGTGGTGGAATAGCCATCGGTGCATGCATGTCCCACAAGATAGCTGATGCTATGTCCTATTTTGTGTTTATCCAACGTTGGGCTGCTATTGCTCGTGGAGAATCATGTGATCATGACACACATTTCATTTCTGCTACCTTATTTCCCCCTAGGGACATGCAGTGGTATGATCCCAACAGAACTATCACAAAACAGAAAATTGTGTCTAAAGTATTAGTGTTTGATGCGTCTGCTATAGACGGTCTTAAAGCAAAGTATGCAAAAAGAATGGATCTGCAGAAACCCCCTTCAAGAGTTGAGGCTCTATCAACTTTCATATGGACCCGCTTTATGGCATCCACTCAGGTTGCAGCATCTGAGAGCCCCAGGTTCTACGTGGTGGCTCACACGGTGAACCTGCGTTCGAGAATGGACCCGCCACTACCAGCATATGCTTTTGGGAACTACTATCGGGCTGTTAAAGAGTTTCCGTCACTGGATGATGAGGGGGAATGTTATGAGTTGGTGAAGAAGTTGAGAGAAGAAATACGGAAAATTGACAGTGATTATATTCTCAAACTTCAAGAGGGTTCTGAATACTTGAACTCTCTTAGAGATGATTTGCGTAAATTCGAGACGATTAAGGGGGAAATTGTGCCGTTTACCTTCACTGCTTTGTGTAGGTTTCCAGTGTATGATGCTGATTTTAGGTGGGGAAAGCCAATTTGGGTATGTCCACCTGCatggaaagtaaaaaatgtCGCTGTTTTTATGGATACCAAGTTAGGTGGTGGAATTGAAGCACATATCAGCATGACGGAGGAGGATATGGTTAGATTTCAAAATGACAGGGAGCTCCTTGTACATAGTTCTACTAAAGTTAAATTGATGGGCGTTCAGATATAG 1305 0.4467 MKVEVEIISKELVKPSSPTPNHLRHYNLSLLDHLTPQLNNSMVYFFAANNVSDQFINASHHLKKSLSKALTHYYPLAGRLVDKAFIECNDEGALYLEARVRCNLNDLVDSPIPSEVSKLLPFGMDDIVDTPLGVQLDIFDCGGIAIGACMSHKIADAMSYFVFIQRWAAIARGESCDHDTHFISATLFPPRDMQWYDPNRTITKQKIVSKVLVFDASAIDGLKAKYAKRMDLQKPPSRVEALSTFIWTRFMASTQVAASESPRFYVVAHTVNLRSRMDPPLPAYAFGNYYRAVKEFPSLDDEGECYELVKKLREEIRKIDSDYILKLQEGSEYLNSLRDDLRKFETIKGEIVPFTFTALCRFPVYDADFRWGKPIWVCPPAWKVKNVAVFMDTKLGGGIEAHISMTEEDMVRFQNDRELLVHSSTKVKLMGVQI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2371 434 PANTHER F21J9.9 2 424 - -
Ssu2g2371 434 Gene3D - 204 426 IPR023213 -
Ssu2g2371 434 PANTHER ANTHRANILATE N-BENZOYLTRANSFERASE 2 424 - -
Ssu2g2371 434 Pfam Transferase family 4 419 - -
Ssu2g2371 434 Gene3D - 1 196 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2371 Ssu-Chr2 81250352 81251656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2371 3 414 Monolignol Biosynthesis Gene Families AT5G48930 24.944 1.67e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2371 K13065 - gmx:100801695 753.821