Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2367 ATGGATTTGCTTCTAAAAACACAAACCATGGCCAACCTCGAGCCATTCCAGACGGCCATCTTGCTGGTCGTCCCACTAATCCTCCTCTGGGGCCTAATATCTCGTACTCGTCGAAGAGCACCATATCCACCAGGACCAAAAGGGTTACCCATAATAGGTAACATGCTAATGATGGAGCAGCTAACCCACCGCGGTCTCGCCAACCTAGCAAAAAGGTACGGCGGCGTATTCCACCTCCGCATGGGGTTCCTCCACATGGTGGCGATTTCGGACCCGGACGCGGCGCGTCAGGTGCTCCAAGTCCAGGACAACATCTTCTCCAACCGCCCCGCGACCATCGCCATCAACTACCTCACCTACGACCGCGCCGACATGGCGTTCGCGCACTACGGCCCCTTCTGGCGCCAGATGCGCAAGCTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGCGCGGAGTCGTGGCAGTCGGTGAGGGACGAGGTCGACGTCGCCGTGCGCGCCGTCGCGGCCAGCACCGGGAGTCCGGTGAACGTCGGGGAGCTGGTGTTCAACCTCACGAAGAACATTATCTACCGCGCGGCGTTCGGGTCCAGCTCCCGCGAGGGGCAGGACGATTTCATTGGGATATTGCAGGAGTTTTCCAAGTTGTTTGGAGCGTTCAATATCGCCGACTTTATACCCTACCTCGGGCGCGTGGACCCTCAGGGGCTGAACGCGCGGCTCGTTAGGGCTCGCGGCGCGCTGGATAGCTTTATCGATAAGATCATCGACGAGCATGTGCAGAAGAGGAAGAAGGGTGAGGTTCGCGATGAGGAAACGGACATGGTGGATGAGTTGCTGGCTTTCTACAGCGAGGAGGCGGCTAAGTTGAATGGTGAATCGGACGATCTGCAGAACTCCATCAGACTCACCAAGGATAACATCAAGGCAATCATTATGGACGTGATGTTCGGAGGGACGGAAACGGTGGCTTCAGCGATCGAGTGGGCCATGGCGGAGCTGATGAGAAGCCCAGAAGACCAAAAGCGGGTCCAACAGGAGCTCGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTCGAGAAACTCACACACCTCAAATGTGTCCTCAAGGAGACACTGCGCCTCCACCCACCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGACGCGACGGTCGCCGGCTACTTCGTTCCGAAGAAGGCGCGCGTGATGATCAACGCGTGGGCCATTGGGAGGGACAAGAACTGCTGGGAGGAACCCGAAACCTTCAAACCCTCCCGGTTTCTGAAACCGGGCGTGCCCGATTTCAAGGGTAGCAACTTCGAGTTCATTCCTTTCGGGTCGGGTCGCAGGTCCTGCCCCGGGATGCAGTTGGGGCTGTACGCGCTCGAGTTGGCAGTGGCTCACCTCCTTCACTGCTTCACGTGGGAATTGCCAGACGGAATGAAACCCAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAAGGGCCACGCGACTCGTTGCCGTGCCAACCAAGCGCGTGGTGTGCCCtctcttttag 1563 0.5854 MDLLLKTQTMANLEPFQTAILLVVPLILLWGLISRTRRRAPYPPGPKGLPIIGNMLMMEQLTHRGLANLAKRYGGVFHLRMGFLHMVAISDPDAARQVLQVQDNIFSNRPATIAINYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDVAVRAVAASTGSPVNVGELVFNLTKNIIYRAAFGSSSREGQDDFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLVRARGALDSFIDKIIDEHVQKRKKGEVRDEETDMVDELLAFYSEEAAKLNGESDDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTHLKCVLKETLRLHPPIPLLLHETAEDATVAGYFVPKKARVMINAWAIGRDKNCWEEPETFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRATRLVAVPTKRVVCPLF 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2367 520 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 6 520 - -
Ssu2g2367 520 Coils Coil 280 300 - -
Ssu2g2367 520 Gene3D Cytochrome P450 35 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 Pfam Cytochrome P450 43 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 SUPERFAMILY Cytochrome P450 43 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Ssu2g2367 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2367 520 PANTHER CYTOCHROME P450 84A1-RELATED 6 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2367 Ssu-Chr2 81165563 81168462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2367 7 519 Monolignol Biosynthesis Gene Families AT4G36220 72.921 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2367 K09755 - gmx:100783430 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2367 2 81165563 81168462 Ssu6g2042 6 38522229 38526715 PCT