Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2357 ATGGAATGGATTATAGGCGTATGTATTGTGATGGGCATGTTCTTGGTGAGTTGGTGGATTCTATATGGCAAGAATGATGAGAACACGGTGGCAAAGGGCAAAGTTCCAAAAGGGAACTCCGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATTGCTTCTGGCTACACCTCAACCCCTGTCAACTTCTTGGAAAAGCGCAAGTCTTTGTACGGGAGTGTGTTTAAGACATGCATTTTGGGAAGCAATGTGATAGTGTCGACGGACCCGGACGTGAACAGGGTGGTTCTGCAGAACCAGGCGAACTTCGTCCCCGCTTATCCAAAATCAGTTAGAGAATTAATGGGAGAACAATCCATACTCAAAATGAACGGGATCATGCATAAGAAAGTGCATACACTCATCGCAGGGTTCCTCCGGTCCCCACAACTCAAAGCTCGAATCACCAGAGACATTGAACACACTGTCAAACAATGCTTCGCTTCTTGGACCCACCAACCAATATATGTTCAAGATCAAGTTAAAAAgATTACATTTCCTGTTTTGATCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGATTTGGACTTCCTGTATAGAGAATTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCCCTCAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTTgaggagaggaagaagctacTCGAGGATAATAGTGCAGATGATCATGGTGATGCAGTGAATGATGTGGTGGACATACTATTACGGGATAAGGGTGACTCCAACTCTACCTCACGCTTGACTCCAGAAATGATTAGCCAAAACATCATCGAGTTTATGATACCAGGGGAGGAAACTCTTCCTACGGCTATGACCATGGCCCTCAAGTTCCTCAGTGACTCCCCTCTCGCTCTATCCAAACTGCAGgAGGAGAACATGGAACTTAAGAAGCTGAAGACGAATTGCTCAGGTGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTTAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAAGCGGTCCAAGACATAGAAATTAAAGGGTACCTAATTCCGAAGCATTGGTGTATTGTGGCATCTCTTACCTCTGTTCACATGGACGGCAAGAACTATGAAAACCCTTTTAAGTTCGATCCATGGAGATGGGAGAAAATTGGAGTTGTGGCTTGTAACAACCTCTTTACCCCATTTGGCGGTGGACATAGATTATGCCCTGGGTTAGAACTCTCCAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACTTACAGTTGGGTCGCTGAGAGGGATGAAATAATCTACTTTCCAACAGTCAAGATGAAGAGGAAGCTCCCAATTAGTGTGCAACCCATTAACACTTAA 1455 0.4302 MEWIIGVCIVMGMFLVSWWILYGKNDENTVAKGKVPKGNSGWPLLGETLDFIASGYTSTPVNFLEKRKSLYGSVFKTCILGSNVIVSTDPDVNRVVLQNQANFVPAYPKSVRELMGEQSILKMNGIMHKKVHTLIAGFLRSPQLKARITRDIEHTVKQCFASWTHQPIYVQDQVKKITFPVLIKVLMSVGPGEDLDFLYREFAEFIKGLICLPLKFPGTRLYKSLKAKDRMVKMVRKIVEERKKLLEDNSADDHGDAVNDVVDILLRDKGDSNSTSRLTPEMISQNIIEFMIPGEETLPTAMTMALKFLSDSPLALSKLQEENMELKKLKTNCSGDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKAVQDIEIKGYLIPKHWCIVASLTSVHMDGKNYENPFKFDPWRWEKIGVVACNNLFTPFGGGHRLCPGLELSRLELSIFLHHLVTTYSWVAERDEIIYFPTVKMKRKLPISVQPINT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2357 484 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 7 479 - -
Ssu2g2357 484 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 Gene3D Cytochrome P450 24 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS E-class P450 group IV signature 433 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS E-class P450 group IV signature 417 433 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 PANTHER CYTOCHROME P450 26 7 479 - -
Ssu2g2357 484 Pfam Cytochrome P450 36 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2357 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Ssu2g2357 484 SUPERFAMILY Cytochrome P450 33 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2357 Ssu-Chr2 80961453 80971213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2357 25 454 Cytochrome P450 AT3G13730 50.345 4.03e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2357 K12637 - gmx:100799030 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2357 2 80961453 80971213 Ssu2g2357 2 80961453 80971213 ECH