Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2295 ATGTCTGACTCACAGTCACACCTAACTTTCTATTCTCTTTCACCCATTCTTGCTCTTCTCCCAATCTTCATCTTCATTCTCATCAAAAGAAAGCAAGGCAGACCCAGGCTCAATCTTCCCCCAGGAAACATGGGCTGGCCATTTCTTGGGGAAACCATTGGCTATTTGAAGCCTTATTCTGCCACTACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATTTACAAGTCGAAACTGTTTGGGGAGCCAGCAATAGTGTCAGCGGATGCAGGACTGAACAGGTTCATTCTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTATCCTAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGTTGGTCTTGGTTGGGGACATGCACAGAGACATGCGGGTTATATCGCTCAACTTTCTAAGCCACGCCAGGCTCAGAACACACCTCTTGAAAGAGGTGGAGAAGCACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTCCACGTTCTCGGCCCAAGACGAAGCTAAGaatTTCACCTTCAATTTGATGGCCAAGCATATCATGAGCATGGATCCTGGGGATATCGAGACAGAGCAACTAAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTGTCCGCGCCATTGAATTTACCAGGAACTGCATACCGAAAGGCGTTAAagTCTAGGTCCACTATACTGAAGTTCATAGAGGGGAAAATGGAAGAAAGAGTCAAAAGAATCCAACAGGGCAACGATGGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGAAGCATTCGAATCTTTCAACAGAGCAGATTCTCGACTTGATTCTCAGTTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATTGCTCTAGCCATTTATTTCTTGCCGGGTTGCCCTCAAGCTATACAACAGTTAAGGgaagaACACAGAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAACTCACTTGGGACGACTACAAACGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTTAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTCAAAGATGTTAACTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGTCGGGGAAGTTGCCCAAGCAAGAGCACAGCCAACAATAACTTCCTTCCGTTCGGGGGAGGACCACGACTATGCGCGGGATCAGAGTTAGCGAAGCTTGAAATGGCTGTTTTCATTCATCATCTCATCCTCAACTACCATTGGGAATTGGCTGATACCGATCAGGCTTTTGCCTACCCCTTTGTCGACTTCCCCAAAGGCCTACCCATAAGAGTCCAAGCCCACTCTTTGGTTTGA 1476 0.4607 MSDSQSHLTFYSLSPILALLPIFIFILIKRKQGRPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNSTFSAQDEAKNFTFNLMAKHIMSMDPGDIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQQGNDGLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAIQQLREEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPSKSTANNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDQAFAYPFVDFPKGLPIRVQAHSLV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2295 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Ssu2g2295 491 Pfam Cytochrome P450 40 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 SUPERFAMILY Cytochrome P450 36 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 Coils Coil 309 336 - -
Ssu2g2295 491 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PANTHER CYTOCHROME P450 26 68 487 - -
Ssu2g2295 491 Gene3D Cytochrome P450 28 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2295 491 PANTHER BNAC01G23810D PROTEIN 68 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2295 Ssu-Chr2 79926647 79930697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2295 29 410 Cytochrome P450 AT3G50660 77.171 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2295 K09587 - gmx:100789515 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2295 2 79926647 79930697 Ssu6g1984 6 36183468 36191630 PCT