Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2248 ATGGCTGTTTCTGTGAACCTGCTGTTACCTCGTTGGTCGGcgtttcttctttttctctttgtctTGTGTAGCTCAGGAGCAAAGGTTGTCACCATTGATGTACGTGCTGCCAAGGGTCTCATCCAGACCGGCTCCATTTATCTTGACGTTAGGACGGTGGAGGAGTTCGTGATAGGGCACGTGGATGCAGTTAATATCGTTAACGTTCCATACATGTTGAATACACCCAAGGGCAAGGTAAAGAATCCAGACTTTCTGAAGGAGGTTTCATCGGCTTGCAACAAAGAAGATCATCTCATTGTGGGTTGTCAAGGTGGGGTGAGATCTCTGTATGCAACTGCTGATCTTCTGTCTGATGGTTTTAAGAATGTGAAAGACATGGGAGGAGGTTATGTGGACTGGGTTAAAAACAAGTTTCCAGTGAATATACCAGGGGCCAAAGAAGAGCtataa 453 0.4371 MAVSVNLLLPRWSAFLLFLFVLCSSGAKVVTIDVRAAKGLIQTGSIYLDVRTVEEFVIGHVDAVNIVNVPYMLNTPKGKVKNPDFLKEVSSACNKEDHLIVGCQGGVRSLYATADLLSDGFKNVKDMGGGYVDWVKNKFPVNIPGAKEEL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2248 150 Pfam Rhodanese-like domain 38 136 IPR001763 -
Ssu2g2248 150 Gene3D - 21 142 IPR036873 -
Ssu2g2248 150 CDD RHOD 36 135 - -
Ssu2g2248 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 16 149 IPR044684 GO:0003824
Ssu2g2248 150 ProSiteProfiles Rhodanese domain profile. 46 143 IPR001763 -
Ssu2g2248 150 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 28 141 IPR036873 -
Ssu2g2248 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 16 149 - -
Ssu2g2248 150 SMART rhod_4 32 140 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2248 Ssu-Chr2 79025600 79026658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2248 28 142 Sulfurtransferasese or Rhodanese AT5G66170 55.652 8.31e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2248 - K15692 gmx:100815122 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2248 2 79025600 79026658 Ssu2g2248 2 79025600 79026658 ECH