Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2241 ATGGGTGGAGTTGACGGTGAATATCTCAAGGAAATAGAGACTGCTCGACGTGATCTTCGCGCTCTCATCAGCGGCAATAAATGCGCCGCCCCTTACATGTTTCGATTAGCGTGGCACGATGCTGGCACCTACAATGCCGAAACCAGAACAGGAGGCCCCAATGGTTCTATCAGGATTCCTGATGAGTTGAAACACAAAGCAAACGAGGAATTGGGAAAGGCAAAAAAATTATGTGAGTCAGTGAAGGGCAAACTTAAAAAAGTTTCATACGCGGACCTTTACCAGCTTGCTGGTGTTGTTGCAGTAGAGGTCACTGGGGGTCCAACTATTGACTTTGTTCCCGGCAGAATGgATTCAGATAAGCCTCCACCAGAGGGGCTCCTTCCAGATGGCAACAAAGATGCACGGGATTTAAGGAATATCTTTTCTCGTATGGGTCTAAGTGACGATAAAGACATCGTGGCTCTATGTGGAGGCCTAAGAACGATGTATCTAGGGGAGAAACCTAAGTGCGAGACAAATATAGATGATTCTGAAGGACAATGGACAGAGGACCCTTTGAAGTTTGATAACTCCTATTTTAAGAGACTATTGAGTTCGAATGAGAATGAATCATTGAGGCTTGACCGTGCTTTAGCAACGGATAACAAATTCCTTCGATATGTTGAACTGTATGCAAAGGATGTGGATGTTTTTTTCAAAGATTATGCAATCGCACATAAGAAACTCTCTGAGCTAGGCTGCAATCTCAAGAAGCCAAACAAGGTAGTTATAGGAATCGGTATAGCATCAGCTGTGGTGACCGTGATATTAGGTTACTTACTGAAGAGGAAGAAAGACCAATTGAagaaatga 855 0.4351 MGGVDGEYLKEIETARRDLRALISGNKCAAPYMFRLAWHDAGTYNAETRTGGPNGSIRIPDELKHKANEELGKAKKLCESVKGKLKKVSYADLYQLAGVVAVEVTGGPTIDFVPGRMDSDKPPPEGLLPDGNKDARDLRNIFSRMGLSDDKDIVALCGGLRTMYLGEKPKCETNIDDSEGQWTEDPLKFDNSYFKRLLSSNENESLRLDRALATDNKFLRYVELYAKDVDVFFKDYAIAHKKLSELGCNLKKPNKVVIGIGIASAVVTVILGYLLKRKKDQLKK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2241 284 Gene3D - 15 247 - -
Ssu2g2241 284 Pfam Peroxidase 16 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 Gene3D Peroxidase, domain 2 129 240 - -
Ssu2g2241 284 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 278 IPR044831 GO:0004601|GO:0034599
Ssu2g2241 284 SUPERFAMILY Heme-dependent peroxidases 13 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 MobiDBLite consensus disorder prediction 113 133 - -
Ssu2g2241 284 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Haem peroxidase superfamily signature 106 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Haem peroxidase superfamily signature 88 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 48 58 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 62 86 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 127 144 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 87 105 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 106 118 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PRINTS Plant ascorbate peroxidase signature 224 248 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 ProSiteProfiles Plant heme peroxidase family profile. 1 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2241 284 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2241 Ssu-Chr2 78920488 78925749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2241 12 247 Peroxidase AT4G30170 26.690 2.61e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2241 K00434 - gmx:100813526 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2241 2 78920488 78925749 Ssu5g0756 5 19395806 19399410 PCT