Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2240 ATGGCAAAGCCTATCGTTGATGCTGAGTATCTCAACGAAATTGAGAGGGCTCGTCGTGACCTTCGCGCTCTTATCTCCAACAAAAACTGCGCCCCTCTCTTGCTTCGATTGGCGTGGCATGACGCTGGAACCTACGACGTTAAAACCAAAACAGGAGGCCCCAATGGTTCTATCAGGAATGAACAAGAGTTGAATCACCCTGCAAACAAGGGGCTGAAAACAGCAGTTGAGTTCTGTGAGGAAGTGAAGGTCAATCATCCAAAAATTTCATATGCGGACCTTTACCAGCTAGCTGGTGTTGTTGCAGTAGAGATCACTGGGGGTCCAACTATTGACTTTATTCCTGGGAGAAAAGATTCGTTGGAATCACCACCAGAAGGGCGTCTTCCAGATGCCAAACAAGGAAAATTCGTTGATATATATGGAAGAATTTCAGGTGCATCACATTTAAGAGAGATATTTTATCGCATGGGTCTAGGTGACACAGACATTGTGGCTCTATCTGGAGGCCACACTTTGGGTAAGGCACATAAAGATCGTTCTGACTTTGAAGGTCAATGGACAAAGAGCCCTTTGAAGTTTGATAACTCCTATTTTGTGGAGTTACTGAAAGGGGAGTCAAAAGATTTATTGAAGCTTCCCACAGACAAGGCTCTAGTTGAGGATGATAAATTCCGCAAGTACGTTGAACTGTATGCGAAGGATGAGGATGCTTTTTTCGCAGATTATGCAACCTCACACAAGAAACTCTCAGAGCTCGGCTTCATTTTCAAGAATAATTCCATATTGGTCAAGGGACTTTTAGCAATCACTATTGCCTTGACTGCGGTGGTCCTCGGTTACTTATATGAACTGAACAAAGTTACCAATTGA 873 0.4376 MAKPIVDAEYLNEIERARRDLRALISNKNCAPLLLRLAWHDAGTYDVKTKTGGPNGSIRNEQELNHPANKGLKTAVEFCEEVKVNHPKISYADLYQLAGVVAVEITGGPTIDFIPGRKDSLESPPEGRLPDAKQGKFVDIYGRISGASHLREIFYRMGLGDTDIVALSGGHTLGKAHKDRSDFEGQWTKSPLKFDNSYFVELLKGESKDLLKLPTDKALVEDDKFRKYVELYAKDEDAFFADYATSHKKLSELGFIFKNNSILVKGLLAITIALTAVVLGYLYELNKVTN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2240 290 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Ssu2g2240 290 ProSiteProfiles Plant heme peroxidase family profile. 72 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Haem peroxidase superfamily signature 163 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 Gene3D Peroxidase, domain 2 130 247 - -
Ssu2g2240 290 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 285 IPR044831 GO:0004601|GO:0034599
Ssu2g2240 290 Coils Coil 7 27 - -
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 PRINTS Plant ascorbate peroxidase signature 231 255 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 Pfam Peroxidase 18 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2240 290 Gene3D - 17 254 - -
Ssu2g2240 290 ProSitePatterns Peroxidases proximal heme-ligand signature. 163 173 IPR019793 -
Ssu2g2240 290 CDD ascorbate_peroxidase 4 257 - -
Ssu2g2240 290 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 285 - -
Ssu2g2240 290 SUPERFAMILY Heme-dependent peroxidases 13 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2240 Ssu-Chr2 78894898 78897903 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2240 31 250 Peroxidase AT4G16270 30.515 8.24e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2240 K00434 - gmx:100806101 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2240 2 78894898 78897903 Ssu2g2240 2 78894898 78897903 ECH