Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2236 ATGGCTGAAGTTGACCAGAAGTATCTCAAGGAAATAGAGAAGGCTCGACGTGAACTTCGCGCTCTCATCAGCGGCAATAAAGGCGCAGCTCCTCTCATGTATCAATTAGCGTGGCACGACGCTGGTACCTACGATgctgaaaaggaaaaggagggCCCAATGGTTCTATCAGGGTCGGGACTGAACATGAGACGCCTGAAGTCCCAACTTGAAAAAGTTTCATACGCCGACCTTTACcagCTTGCTGGTGTTGTTGCAGTAGAGGTCACTGGGGGTCCAATTATTGACTTTACTCCTGGGAGAAAAGATTCATTGGAATCTCCACAAGGAGGGCGTCTTCCAGATGCCAACCAAGATGCACGGGATTTAAGGAATACCTTTTCTCGTATGGGTTTAAGTGACGATAAAGACATCGTGGCTCTATGTGGAGGCCTAAGAACAATGTATCTGGGCAAGACACCTGGGGGCGAGACAACTGAGGACAAGACACATGAGGACAACATAGCTACAGATGACATGAAAAGTGTGGGGGAGAAAACTTCTGTTCCTGAAGTTGAATGGCCAGGCGACCATTTGAAGTTTGATAACACCTATTTTGTGTATCTATCGAGTAATAACAAATCATTGATGATTCCCATGGACCATGCTTTAGCAACGGATACAAAATTCCTCCAGTATGTTGATGTGTATGTAAAGGATATGGATGCTTTTTCAAAGATTATGCAATCGCACATAAGAAACTCTCTGAGCTAG 753 0.4369 MAEVDQKYLKEIEKARRELRALISGNKGAAPLMYQLAWHDAGTYDAEKEKEGPMVLSGSGLNMRRLKSQLEKVSYADLYQLAGVVAVEVTGGPIIDFTPGRKDSLESPQGGRLPDANQDARDLRNTFSRMGLSDDKDIVALCGGLRTMYLGKTPGGETTEDKTHEDNIATDDMKSVGEKTSVPEVEWPGDHLKFDNTYFVYLSSNNKSLMIPMDHALATDTKFLQYVDVYVKDMDAFSKIMQSHIRNSLS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2236 250 MobiDBLite consensus disorder prediction 99 118 - -
Ssu2g2236 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 239 IPR044831 GO:0004601|GO:0034599
Ssu2g2236 250 Gene3D Peroxidase, domain 2 114 239 - -
Ssu2g2236 250 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PRINTS Haem peroxidase superfamily signature 73 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PRINTS Haem peroxidase superfamily signature 91 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 Pfam Peroxidase 16 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 239 - -
Ssu2g2236 250 Gene3D - 15 113 - -
Ssu2g2236 250 ProSiteProfiles Plant heme peroxidase family profile. 73 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PRINTS Plant ascorbate peroxidase signature 179 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2236 250 SUPERFAMILY Heme-dependent peroxidases 13 238 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2236 Ssu-Chr2 78820394 78823362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2236 71 237 Peroxidase AT4G16270 31.319 2.28e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2236 K00434 - qsu:112035433 207.608