Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2221 ATGGAAGAGGTGTGGAAAGACATCAACCTCGCTACCTTAAATGACAAAACCAGTCGCCCCACCAGTGCCCACCCCAACTTGGGGGGCGTAATGTTCCAAGACTTTCTGGCTCGACCCTTCAGCTTAGACCCACCAAACAGCATACTGTCCTCTGCTTCTGCAGAAAGTGCGTCTCTTTACTGCCCTGCAGCATCGCCGGCCCCACCTCTCGTCACTGCCCTCAGCTTGAACTCTCGCCCCGACTTGCATTTCGACGCCCTCGCACCCAAACCCTCACAGCCCCACCACCATGCCTCTTCCAACGTCTCTTGTTTCACAGACCCATCCCCGCTTCACAGCCTCGCCTCCGTCAACTGCTTAGGCACCAAACGATTTGCTGAACCCGCGCCTGATTGCAGCCAAGGCGACAGAAGAAATAAGCGTATGATAAAGAATCGTGAGTCCGCTGCACGATCGCGTGCTAGAAAACAGGAAAATATTGCTTCCTTCTTTCGCTCCTAA 501 0.5429 MEEVWKDINLATLNDKTSRPTSAHPNLGGVMFQDFLARPFSLDPPNSILSSASAESASLYCPAASPAPPLVTALSLNSRPDLHFDALAPKPSQPHHHASSNVSCFTDPSPLHSLASVNCLGTKRFAEPAPDCSQGDRRNKRMIKNRESAARSRARKQENIASFFRS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2221 166 Gene3D - 136 163 - -
Ssu2g2221 166 PANTHER PROTEIN FD-LIKE 1 161 - -
Ssu2g2221 166 MobiDBLite consensus disorder prediction 125 166 - -
Ssu2g2221 166 Pfam bZIP transcription factor 136 161 IPR004827 GO:0003700|GO:0006355
Ssu2g2221 166 MobiDBLite consensus disorder prediction 130 160 - -
Ssu2g2221 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 140 155 IPR004827 GO:0003700|GO:0006355
Ssu2g2221 166 CDD bZIP_plant_BZIP46 137 163 - -
Ssu2g2221 166 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 161 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2221 Ssu-Chr2 78636009 78636509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2221 1 158 bZIP Transcription Factor Family AT4G35900 39.665 1.16e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu2g2221 bZIP_1 1.9e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2221 K14432 - gmx:102660922 136.732