Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2215 ATGGCTGTCATGGTTGCATTCTTGAATTTGATCATCATGTTAGTAGTCTCTACAGGCAAGTCACTGAGCTTAAACTACTATGAAAAAACATGCCCTGATCTGGAGTTCATTGTTGCCCAGGCAGTGAAGGATGCCACTGCTAAGGACAAAACTGTTCCAGCAGCACTTCTAAGAATGCATTTCCATGATTGTTTCATTCGGGGGTGTGATGCCTCTGTGCTGCTAAATTCAAAAGGAAACAACAAAGCAGAAAAAGACGGGCCCCCAAACGTTTCTTTGCATGCATTCTATGTCATCGATGCAGCAAAGAAAGCAGTAGAAGCTTCATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTTGCTCTAGCAGCAAGGGACGCAGTTTTTCTGTCTGGAGGACCTAGATGGGATGTTCCTAAAGGAAGAAAAGATGGTAGAACATCTAAGGCCAATGAAACCATACAATTACCAGGGCCAACCTTCAAATTATCACAACTGAGGCAAAGCTTCTCTCAAAGAGGACTGTCAGGGGAAGACCTGGTAGCTCTGTCAGGGGGACATACTTTGGGTTTCTCTCACTGCTCATCTTTCCAGAACAGAATCCGCAACTTTGATGCTACACATGATGTGGACCCTTTATTAAATCCGTCATTTGCAGCAAAACTGAAATCAATTTGTCCACTAAAAAATCAGGCAAAAAATGCAGGCACCACTATGGACCCTTCTTCAACAACTTTCGATAATACATATTACAAGTTGATCCTCCAACATAAAGGCCTGTTTTCTTCTGATCAAGCTTTGCTTGATAACCCAGACACCAAGAATCTGGTTACGAAGTTTGCCACCTCACAAAAGGCTTTTTATGAGGCTTTTGCGAAGTCCATGATCAAAATGGGAAGCATCAATAGTGGGCAGGAGGTTAGAAAGGACTGCAGAGTGATCAATTAA 948 0.4314 MAVMVAFLNLIIMLVVSTGKSLSLNYYEKTCPDLEFIVAQAVKDATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNVSLHAFYVIDAAKKAVEASCPGVVSCADILALAARDAVFLSGGPRWDVPKGRKDGRTSKANETIQLPGPTFKLSQLRQSFSQRGLSGEDLVALSGGHTLGFSHCSSFQNRIRNFDATHDVDPLLNPSFAAKLKSICPLKNQAKNAGTTMDPSSTTFDNTYYKLILQHKGLFSSDQALLDNPDTKNLVTKFATSQKAFYEAFAKSMIKMGSINSGQEVRKDCRVIN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2215 315 ProSiteProfiles Plant heme peroxidase family profile. 21 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PANTHER PEROXIDASE 8 314 - -
Ssu2g2215 315 Gene3D - 25 315 - -
Ssu2g2215 315 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 Gene3D Peroxidase, domain 2 157 298 - -
Ssu2g2215 315 Pfam Peroxidase 38 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Ssu2g2215 315 CDD secretory_peroxidase 22 314 IPR033905 GO:0004601|GO:0042744
Ssu2g2215 315 PANTHER PEROXIDASE 25-RELATED 8 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2215 315 SUPERFAMILY Heme-dependent peroxidases 22 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2215 Ssu-Chr2 78503745 78505040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2215 2 314 Peroxidase AT5G42180 65.605 4.70e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2215 K00430 - gmx:547873 570.466