Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2209 ATGGATGGAGTTGACGAGGAATATCTCAAGGAAATAGAGATGGCTCGACGTGAACTTGTCGCTCTCATCACCAGCAATAAAGACGCCGCCCCTCTCATGTTTCGATTAGCGTGGCACGATGCTGGTAACTACGATGCTACAACCGGAACAGGGGGCCCCAATGGTTCTATCAGGACTTTTCAAGAGTTGAACCACAAAGCAAACGAGGGATTGGGAAAAGCAGTTCAATTATGtgGAGACTTGAAGGCAAAGGCCAAACTTGAAAGAGTCTCATTCGCAGACCTTTACCAGCTTGCTGGTGTTGTTGCAGTAGAGGTCACCGGAGGTCCAAGTATTGATTTTGTTCCAGGCAGAAAGGATTTAGCCAAGTCCCCACCAGAAGGGCGCCTTCTAGATGGCAAAGAAGATATTTCACATTTAAGGGAAACCTTTTCTCGTATGGGTCTAAGTGACGATAAAGACATCGTGGCACTATGTGGAGGCCTAAGAACGATGTATCTAGGCAAGCCACGTGAAGATCGTTCTGAAGGTCAATGGACAAAGGACCCTTTGAAGTTTGATAATTCCTATTTTAAGGAACTATTGAGGAAGGATGCACCCTTTTCGAGGCTTCCCATGGACAATGCTTTAGTAGCGGATGAAAAATTCTATCACTATGTTAAGCAGTATTCAAAGGATGAAGATAGTTTTTTCAAAGATTATGCAGTCTCACATAAGAAACTCTCCGAGCTAGGCTGCAATCCCGACAAGATAAATCAGCCCAAGGTATCGAATGAGAAGCTAAATCAGCCCAAGCCCAAGGTACAGGATGAGAAGCTAAATCAGCCCAAGCCCAAGGAACCGGATGAGAAGCTAAATCAGCCCGAGGTACCACCAGATGGGAAGTTAAATCGGCCCAAGGGACCATGTGAGAAAATAAAGCAGAACAAAGGACTTATAGGAATCAGCATAGTATCAGTTGTGGTGACCGTGATATTAGGTTTCTTactgaagaggaagaaaaaccAAGtgaaaaattga 1020 0.4353 MDGVDEEYLKEIEMARRELVALITSNKDAAPLMFRLAWHDAGNYDATTGTGGPNGSIRTFQELNHKANEGLGKAVQLCGDLKAKAKLERVSFADLYQLAGVVAVEVTGGPSIDFVPGRKDLAKSPPEGRLLDGKEDISHLRETFSRMGLSDDKDIVALCGGLRTMYLGKPREDRSEGQWTKDPLKFDNSYFKELLRKDAPFSRLPMDNALVADEKFYHYVKQYSKDEDSFFKDYAVSHKKLSELGCNPDKINQPKVSNEKLNQPKPKVQDEKLNQPKPKEPDEKLNQPEVPPDGKLNRPKGPCEKIKQNKGLIGISIVSVVVTVILGFLLKRKKNQVKN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2209 339 Pfam Peroxidase 16 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 MobiDBLite consensus disorder prediction 264 289 - -
Ssu2g2209 339 Gene3D - 16 245 - -
Ssu2g2209 339 Gene3D Peroxidase, domain 2 131 238 - -
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 48 58 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Plant ascorbate peroxidase signature 222 246 IPR002207 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 254 IPR044831 GO:0004601|GO:0034599
Ssu2g2209 339 SUPERFAMILY Heme-dependent peroxidases 7 250 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 MobiDBLite consensus disorder prediction 246 303 - -
Ssu2g2209 339 ProSiteProfiles Plant heme peroxidase family profile. 13 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2209 339 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 254 - -
Ssu2g2209 339 Coils Coil 330 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2209 Ssu-Chr2 78402766 78406419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2209 90 245 Peroxidase AT4G31760 26.531 1.10e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2209 K00434 - gmx:100813526 337.035