Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2198 ATGAAAGCAATGACAGCTACAACGTTTGATGTCTCAGCCGCTTGCTTCCGTGCCCCTCCTTCATGTTCTCCCCTCTCCTCACCCAATCTATGCCGCACCagCTCTTCATTTCTAAAACCCGTGAATCCTCACAAGGGACGGATAAGCGTTACTGTTCCACCCAAGTTTCCAAACTTCCGGACGGAAACTGCTCTGAAGGGGAATTTGGAGGCTGTTAGAGTCCCAACTTCGGTGCCCGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCATCGCTATTTGGATGTCAGGACCCCGGAAGAATTCAATGCTGGACACGCTCCTGGCGCAGTTAACACACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAGAACAGCAACTTTCTTAGAGAGGTGTCTTCACATTTTAGGAAAGATGATGAAATTATTGTTGGGTGTCAACTTGGTAAAAGATCTATGATGGCTGCAAGTGACTTGCTAGCTGCGGGGTTCACTGGACTCACAGACATGGCTGGTGGTTATGCTGCTTGGACACAAAATGGACTTCCGACAGAACAATGA 564 0.4823 MKAMTATTFDVSAACFRAPPSCSPLSSPNLCRTSSSFLKPVNPHKGRISVTVPPKFPNFRTETALKGNLEAVRVPTSVPVRVAYELLLAGHRYLDVRTPEEFNAGHAPGAVNTPYMFRVGSGMTKNSNFLREVSSHFRKDDEIIVGCQLGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTEQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2198 187 Gene3D - 63 186 IPR036873 -
Ssu2g2198 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 187 - -
Ssu2g2198 187 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 73 186 IPR036873 -
Ssu2g2198 187 SMART rhod_4 77 184 IPR001763 -
Ssu2g2198 187 CDD RHOD 94 178 - -
Ssu2g2198 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 187 - -
Ssu2g2198 187 Pfam Rhodanese-like domain 93 180 IPR001763 -
Ssu2g2198 187 ProSiteProfiles Rhodanese domain profile. 87 187 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2198 77 184 Sulfurtransferasese or Rhodanese AT5G66170 47.273 9.13e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2198 - - aprc:113868825 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2198 2 78187078 78189389 Ssu6g2094 6 40413924 40417246 PCT