Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2169 ATGGACGAGGTTGTCAGGGTGATTGATGAATATAAAGTTACACACTTTCCTGTTGTTCCGCCAATTTTGACGGCATTGATAACGAGGGCAAAGGGTGTTCATGGCAGTAAGTTGCAGAGTTTGATACAGGTCTCCAGCGGTGCAGCACCTTTGAGCATGGGAGTTATTAATGATTTTCTCCAAACTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGCAATTATTCTTCAATAGGGTTGTTGGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATACTGGTGCTTTTTTGCCCCAGGCAGCAGCGGGGAACTTTGGTTGA 378 0.4392 MDEVVRVIDEYKVTHFPVVPPILTALITRAKGVHGSKLQSLIQVSSGAAPLSMGVINDFLQTFPNVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWNTGAFLPQAAAGNFG 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2169 125 Gene3D - 2 89 - -
Ssu2g2169 125 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 123 - -
Ssu2g2169 125 Pfam AMP-binding enzyme 4 122 IPR000873 -
Ssu2g2169 125 Gene3D Luciferase; Domain 3 90 122 - -
Ssu2g2169 125 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 2 123 - -
Ssu2g2169 125 SUPERFAMILY Acetyl-CoA synthetase-like 3 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2169 Ssu-Chr2 77657194 77658049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2169 3 124 Monolignol Biosynthesis Gene Families AT4G19010 68.033 2.71e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2169 K01904 - gmx:100804808 219.935