Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2168 ATGAAGGGATACCTGAATAATGAGGAAGCTACAATGTCAACAATTGATAAGGATGGTTGGCTACGTACTGGAGATGTTGTTTATTTTGATCATGATGGGTATTTACATATATCTGACCGCCTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCTCCTGCCGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGGTGCTATGGATGAAGAAACTGGGGAGATGCCAGTGGCATTTCTGGTCAGGAAGGTTGGAAGTGTACTGTCTCCAAAGCATATTATGGACTATGTTACTGAGCAGGTTGCTCCATATAAGAAGGTTAGGAAAGTGTTCTTCACTGACAAGATACCAAGATCTGCGACTGGGAAGATATTACGAAAGCAGCTGAGGAATTGCTTGACTTCTAAactataa 438 0.3995 MKGYLNNEEATMSTIDKDGWLRTGDVVYFDHDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEIVDVAVTGAMDEETGEMPVAFLVRKVGSVLSPKHIMDYVTEQVAPYKKVRKVFFTDKIPRSATGKILRKQLRNCLTSKL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2168 145 Pfam AMP-binding enzyme C-terminal domain 57 131 IPR025110 -
Ssu2g2168 145 SUPERFAMILY Acetyl-CoA synthetase-like 1 141 - -
Ssu2g2168 145 Gene3D - 1 42 IPR042099 -
Ssu2g2168 145 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 144 - -
Ssu2g2168 145 Gene3D - 43 144 IPR045851 -
Ssu2g2168 145 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 1 144 - -
Ssu2g2168 145 Pfam AMP-binding enzyme 1 47 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2168 Ssu-Chr2 77654491 77657179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2168 1 145 Monolignol Biosynthesis Gene Families AT4G19010 62.759 2.70e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2168 K01904 - gmx:100804808 271.166