Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2150 ATGAGTGGTGCTGGTGGTGGGTGCCCCTGCCCCAGGGGCAATAGTGAGTGTTCCATGGAGGATCAGAATGGTGATACGGTAGggaatttgaatcagaatattgGGAAGCCTCCAAGGGACCATTCGGTTTTGCGCCATTGCAGCAGCTCTTCTTGGTCTGCTGAACCGGAAtcgaatattaatattattggaCTTAAATCAAGCACAGAAGAAAAATCAGACTTTTCACTTGTATTGCGATCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTTCATGGAGGATGAGTTCATATGTGTTGATATTCTTCAGGAATGTGTCGATCCAAGAGCAGACCTTCCTTCTCCTGCAGCATTTTACGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTACCAGAAAGAACATCCTGAAGTTTATAGTTGAAGATGCACATTTCCCATCTGGCATTAAGAAAGCAGTTAAGAGTGCATTCGTGAAGGCTGATCTTGCATTTAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACCGCTCTAGTAGCCCTTATGTTGGGAAGTTTCATGTTGATTGCCAATGCGGGGGATTCTCGTGCTGTATTGGGCAAACGGGGCAGAGCCCTTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCCAAGAGCCCCTTAAGCTCTGAGCCGGAGCTGGAGGAGATTGTCCTGACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTGTGGGATGTGATGAGCAGCCAGTGTGCTGTTACAATGGTGAGGAGGGAGCTCATGCAGCATAATGATCCCACCAAATGTGCAAAGGTACTTGTTGATGAGGCCCTACAACGTAACACGTGTGACAACCTGACAGTTGTGGTGGTGTGTTTCTCCAAAGATCCACCTCCTAAAATCGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAAGGCCTTGATCTTCTCAAGGGTGTCCTGAATGGTAGATGA 1125 0.4453 MSGAGGGCPCPRGNSECSMEDQNGDTVGNLNQNIGKPPRDHSVLRHCSSSSWSAEPESNINIIGLKSSTEEKSDFSLVLRSGSCSEKGPKQFMEDEFICVDILQECVDPRADLPSPAAFYGVFDGHGGVDAASFTRKNILKFIVEDAHFPSGIKKAVKSAFVKADLAFRDASALDSSSGTTALVALMLGSFMLIANAGDSRAVLGKRGRALELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTKCAKVLVDEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2150 374 SUPERFAMILY PP2C-like 74 341 IPR036457 -
Ssu2g2150 374 PANTHER PROTEIN PHOSPHATASE 2C 15 361 IPR015655 GO:0004722|GO:0006470
Ssu2g2150 374 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Ssu2g2150 374 MobiDBLite consensus disorder prediction 19 54 - -
Ssu2g2150 374 ProSiteProfiles PPM-type phosphatase domain profile. 80 340 IPR001932 -
Ssu2g2150 374 CDD PP2Cc 80 340 IPR001932 -
Ssu2g2150 374 SMART PP2C_4 70 338 IPR001932 -
Ssu2g2150 374 MobiDBLite consensus disorder prediction 19 36 - -
Ssu2g2150 374 Pfam Protein phosphatase 2C 81 332 IPR001932 -
Ssu2g2150 374 Gene3D - 64 344 IPR036457 -
Ssu2g2150 374 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 15 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2150 Ssu-Chr2 77444547 77446547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2150 63 372 PP2C-type Phosphatase Gene Family AT3G51470 77.742 4.26e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2150 K14803 - gmx:100786416 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2150 2 77444547 77446547 Ssu2g2150 2 77444547 77446547 ECH