Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2145 ATGACTGTACCTTTCTCTCCGATCTCCACAATAGACCTCTTACGCGCTTCTGAAGTTGCTATCGTGGTTTCAAGCAACAGTTTTAATTCCTCAAAGTTCAAAGAGCTGTTTTGTGGTGTGTTGTCTTCATGGTTATGCTTTGGAGGTTTGGCCATGGCAGCAAGTGAGAGTAGCAGCAGTTCCAGAGAACTCGACCAGACACCAACGTGGGCCGTTGCTGCTGTGTGCACTGTTTTCATCTTGATATCCTTAACATTGGAGAAGGGTCTCCACAAAGTTGGGACGTGGCTTGGACAAAAGCAAAAGAAGGCTTTGCTTGAGGCTTTGGAGAAGGTCAAGGctgaGTTGATGATTTTAGGTTTCCTTTCACTGCTTTTGACTTTCGGACAAAGTTACATTGTCAAAATATGTATTTCTGAAAAGATCGCATCCAAAATGTTGCCATGTCCATATAATAGTGAATCAAATAGTGAAGAGGAAAATCGTAGGAAACTTCTGTCTTATGAACGTAGATATTTAGCTGCTGATACTACCTCGTACAAATGCAGCAAGGAGGGACATGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTCCTTCATGTGTTTTATAGTGCTGTCACAATGCTTCTTGGAAGACTAAAGATACGTGGATGGAAGGCATGGGAGGCGGAGACTTCAACTCATGATTATGAGTTCTCCAATGATGCTTCAAGATTTAGGCTTACTCATGAAACATCATTCGTGAGAGCCCATGCCACTTTTTGGACAAGGATTTCTATCTTCTCCTATATTCGCTGCTTCTTTAGGCAGTTTTATAGGTCTGTAAATAAGACTGACTACCTGACTTTGCGCAATGGGTTTATCACTGTCCACCTGGCTCCTGGAAGTAGATTTAATTTccaaaagtatatcaaaagatcatTAGAAGATGACTTCAAGGTGGTTGTGGGAGTCAGTCCTGTCCTCTGGGCATCAGTTGTAATTTTCCTCCTCATCAATGTTAATGGTAAGCAACCAGTTGCATGGGGACCATTTAATTGGTTGCAGATAATTTTGGCTGTTGGAACAAAACTTCAAGCCATATTGGCAAAGATGGCTCTTGAAATCACCGACAGACACGCTGTTGTCCAAGGAATGCCTCTTGTTCAAGGCTCAGACAAATACTTTTGGTTTGGTCGACCACAGTTAGTTCTTCACCTTATCCATTTTGCTTTATTCCAGAATGCGTTCCAAGTAACATATATCTTGTGGATATGGGTAATGAAGTTCATGACACTATCTTGA 1314 0.4102 MTVPFSPISTIDLLRASEVAIVVSSNSFNSSKFKELFCGVLSSWLCFGGLAMAASESSSSSRELDQTPTWAVAAVCTVFILISLTLEKGLHKVGTWLGQKQKKALLEALEKVKAELMILGFLSLLLTFGQSYIVKICISEKIASKMLPCPYNSESNSEEENRRKLLSYERRYLAADTTSYKCSKEGHEPLLSVNGLHQLHILIFFLAVLHVFYSAVTMLLGRLKIRGWKAWEAETSTHDYEFSNDASRFRLTHETSFVRAHATFWTRISIFSYIRCFFRQFYRSVNKTDYLTLRNGFITVHLAPGSRFNFQKYIKRSLEDDFKVVVGVSPVLWASVVIFLLINVNGKQPVAWGPFNWLQIILAVGTKLQAILAKMALEITDRHAVVQGMPLVQGSDKYFWFGRPQLVLHLIHFALFQNAFQVTYILWIWVMKFMTLS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2145 437 PANTHER MLO-LIKE PROTEIN 1 47 430 IPR004326 GO:0006952|GO:0016021
Ssu2g2145 437 PANTHER MLO-LIKE PROTEIN 47 430 - -
Ssu2g2145 437 Pfam Mlo family 62 430 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2145 Ssu-Chr2 77364345 77368962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2145 53 429 MLO family AT2G17480 67.717 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2145 K08472 - gmx:100790155 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2145 2 77364345 77368962 Ssu2g2145 2 77364345 77368962 ECH
Ssu2g2145 2 77364345 77368962 Ssu5g0819 5 21189177 21194793 ECH
Ssu2g2145 2 77364345 77368962 Ssu5g0819 5 21189177 21194793 PCT