Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2126 ATGACCATTGATGTGCCACCATCCGGGGCCCAAAGTGTGAGGACAAACAGATCTTCCTTTAGTTCTAGCAATGGCCATGATGCTACCCCGTTACACAACTATGCATCTGTTAGCGATGGTGATGGCTATGATAGTGATGGCTCCAATTTTGCACCACCCACACCAACAACTCTATCAATGGCTATTCCAGCAGAACTCGCTGGAGCTGTGGAAGGATTCTTAAAATTGATGCATAAACAAATTCAATCTTCTGGAAAACGtggatttttttctaaaagatctGTGGGCCCCCAAGTTCGAGAGAAATTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTACATCATTGCTTAAGCTGAATGGTGACTTGACGAGCCGAGcaacaaaattatttcaaataattttgaaatatattggAGTTGATTCATCTGACCGTGTAACTCCATTAAGCTTAGAAGAACGAGTTGAGCTTGTTGGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTCCAGATATCAAAACAAACGAGAAACAACCCTGAGAGGGAATACTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCTTCGTCCATGCCTCCTAGTAAAGACATTGGAGCATATCTATCAGAATATGTTCATAATGTGGCACATGGTGTGACTACTGATGCTGAGATCCGATCCCTTGCATTAAATACGTTAAATGCTTTGAAGCACTCTGTCAAAGCTGGTCCTAGACATATAATACCTGGGCCTATTGAGATTGAAGCTCTGTTGACTGGGAAAAGGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACATATGACATGTCAACGACAGTTGCCGATGCTGTTGAGGAACTTGCAGGGATCATTAAACTGTCGACATACTCGAGCTTTAGCATGTTTGAATGTCGTAAAGTTGTTACTGGCTCCAAATCACCTGATTCTGGGAATGAGGAGTACATTGGGTtagatgataataaatatattgggGATCTCCTGGCGGAATTTAAGGCAGTGAAAGATCGAAGTAAGGGAGAAATTTTGCACTGTAAACTAATATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTGCGCAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCACTGACTGGAATTCATTTCTAGAGCGATTTCTGCCCAGACAAATAGCAATGACTCGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGTCGCATGTGACGAAAGATGACGCAAGACAGCAATTTCTGCATATATTGAGAACACTTCCCTATGGGTTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTCTTACCTGGACGAATAATATTGGGAATCAACAAGAGAGGGGTCCATTTTTTCCGTCCTGTTCCGAAGGAATATATGCACTCTGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGccgtattttttaaaatgcgaGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACAAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGACGTAATGCTGCGCCGTTATTCCAAAGCACGATCTGCTGCTGCTGGTTCCTTGGACGaagatgtttataataattttaagccTTCTAATTTGGACTTATATGAAAAACGTGTTCAAGATTTATCAAAACTTGTTGAAGAGTCTCAAAGGAATGCTGATCAATTGCTGGAAAAATTGCGGGAGAAGCAAAAACAAGAAGAGGAAATGCTACAAGAATTAGAGGgcttaaaaaaatctataaaagcTGATAAGCAGAGTCTTACAGAAGTTACAAATGACCGTGACAAGCTTAGGTCATTACATGATGAAAAAGATAAGGCACTTCAGGCTATAATTCTAGAGAAAAGAAACATGGAAGCAAAGATGGCCAAGTTGAGTAATCTGGTTGCAGAGAACACTGCAAAAAAGGACCCCATTCAAGCAAATAACCAAGTGTCACAAAAACTTGAAGATGACCTAAAACTATGTAAAAGTGAGCTGCTTGGAGCTGAAGAGGCTATCAAAAGCTTGAGAAGTGAAAAGTTGATTTTGGAACAGAAGCTATCTGAGCTTGAGAAGAAGAGTGCTGAAGAGATTAGTTCTCTTCATTGGAAACTTGAGCAAGAACGCAAAATTCTGAACTCTCAAGTATATGACCTTGAACAAAAATTGTATGTCTTTAGACAAGAATTAACTGTGGCTGAGTCTACACTCTCGGTCAAGGACTCTGAATTGGCTGCATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGTCATACTGAAGATGCAAGCGACTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTCAGAAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAGATCAGAGTTTATTGTCGGTTAAGACCTCTTAGTGAAAAAGAGATTGcaagcaaagaaaaagattcTCTTACTACTGTAGATGAGTTTACAGTTGAGCATCCATGGAAAGATGATAAGCCAAAGCAGCACATATATGACCGTGTGTTTGATGGTGATGCCGCTCAAGAAGATGTATTTGAGGATACAAGGTACTTAGTGCAATCTGCTGTAGATGGTTATAATGTTTGTATATTTGCTTACGGTCAAACTGGCTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAATCCTGGGCTTACCCCTCGTGCTACTGCAGaactttttagaattttaaggAGAGACAgtaacaagtattctttttccttGAAGGCATATATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCCAAGgGAATGGTAACAGTAGAAAATGTAACAATTGTGTCAATTTCTACTGTGGAggaattaaataacataatacaGAGGGGATCTGAGCAGCGACATACATCAGGGACACAAATGAATGATGAAAGCTCAAGATCTCATCTCATACTATCAATTGTCATTGAAAGTACTAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCCGGCtcagaaagaataaaaaagtcaGGCTCTGCAGGTAATCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTGGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTTATGTTTGTGAATGTATCTCCAGCAGAATCAAGCTTGGATGAGACGCATAACTCTCTAATGTATGCATCGCGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCTAAAGAGATAGCTCGACTAAAGAAATTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGAGGATGAAGATTTGGAAGAAATCCAAGAAGAAAGACCAACTAAAGAGAGGACTGATGGCCGGCATTCTATGTAG 3786 0.3727 MTIDVPPSGAQSVRTNRSSFSSSNGHDATPLHNYASVSDGDGYDSDGSNFAPPTPTTLSMAIPAELAGAVEGFLKLMHKQIQSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNGDLTSRATKLFQIILKYIGVDSSDRVTPLSLEERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPEREYLIKAWELMYLCASSMPPSKDIGAYLSEYVHNVAHGVTTDAEIRSLALNTLNALKHSVKAGPRHIIPGPIEIEALLTGKRLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSMFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRAKREWELDILSCYHSLSHVTKDDARQQFLHILRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAAGSLDEDVYNNFKPSNLDLYEKRVQDLSKLVEESQRNADQLLEKLREKQKQEEEMLQELEGLKKSIKADKQSLTEVTNDRDKLRSLHDEKDKALQAIILEKRNMEAKMAKLSNLVAENTAKKDPIQANNQVSQKLEDDLKLCKSELLGAEEAIKSLRSEKLILEQKLSELEKKSAEEISSLHWKLEQERKILNSQVYDLEQKLYVFRQELTVAESTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAVILKMQATQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIASKEKDSLTTVDEFTVEHPWKDDKPKQHIYDRVFDGDAAQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVTVENVTIVSISTVEELNNIIQRGSEQRHTSGTQMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERIKKSGSAGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQEERPTKERTDGRHSM 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2126 1261 ProSitePatterns Kinesin motor domain signature. 1106 1117 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu2g2126 1261 Pfam FERM central domain 381 495 IPR019748 -
Ssu2g2126 1261 ProSiteProfiles FERM domain profile. 275 589 IPR000299 GO:0005856
Ssu2g2126 1261 Coils Coil 813 846 - -
Ssu2g2126 1261 ProSiteProfiles MyTH4 domain profile. 111 270 IPR000857 GO:0005856
Ssu2g2126 1261 SUPERFAMILY Prismane protein-like 828 889 IPR011254 GO:0003824|GO:0016491
Ssu2g2126 1261 MobiDBLite consensus disorder prediction 1 56 - -
Ssu2g2126 1261 Coils Coil 613 672 - -
Ssu2g2126 1261 MobiDBLite consensus disorder prediction 1 31 - -
Ssu2g2126 1261 SMART kinesin_4 883 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 1234 IPR027417 -
Ssu2g2126 1261 PRINTS Kinesin heavy chain signature 1076 1093 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 PRINTS Kinesin heavy chain signature 1107 1125 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 PRINTS Kinesin heavy chain signature 957 978 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 PRINTS Kinesin heavy chain signature 1156 1177 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 CDD FERM_C_KCBP 493 598 - -
Ssu2g2126 1261 CDD FERM_B-lobe 390 488 IPR019748 -
Ssu2g2126 1261 Gene3D - 1209 1257 - -
Ssu2g2126 1261 PANTHER KINESIN-RELATED 607 1257 IPR027640 GO:0003777|GO:0007018
Ssu2g2126 1261 SMART B41_5 271 495 IPR019749 -
Ssu2g2126 1261 CDD KISc_C_terminal 883 1208 - -
Ssu2g2126 1261 ProSiteProfiles Kinesin motor domain profile. 885 1206 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 Pfam Kinesin motor domain 891 1206 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g2126 1261 Gene3D MyTH4 domain 90 272 IPR038185 -
Ssu2g2126 1261 Gene3D - 387 488 IPR014352 -
Ssu2g2126 1261 SUPERFAMILY PH domain-like 495 583 - -
Ssu2g2126 1261 Gene3D - 274 378 - -
Ssu2g2126 1261 Pfam MyTH4 domain 164 268 IPR000857 GO:0005856
Ssu2g2126 1261 Gene3D - 493 600 IPR011993 -
Ssu2g2126 1261 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 607 1257 - -
Ssu2g2126 1261 Coils Coil 690 717 - -
Ssu2g2126 1261 SUPERFAMILY Second domain of FERM 373 490 IPR035963 -
Ssu2g2126 1261 Coils Coil 728 769 - -
Ssu2g2126 1261 SMART MyTH4_1 111 270 IPR000857 GO:0005856
Ssu2g2126 1261 MobiDBLite consensus disorder prediction 1232 1261 - -
Ssu2g2126 1261 Gene3D Kinesin motor domain 872 1208 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2126 Ssu-Chr2 76898973 76907723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2126 51 1256 Calmodulin-binding Proteins AT5G65930 73.602 0.0 1816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2126 - - gmx:100782701 2211.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2126 2 76898973 76907723 Ssu2g2126 2 76898973 76907723 ECH