Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2121 ATGTCATTCTTCGTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTGATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCACACAGCCAGCCATTCCGGTCTTTACCTTTCTGTTAGCTGTAATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACTATTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGAAATGCAGAAATCGATCATGTAacacaaaatgaaataagtgCCAGAGGTCAGCCAGAGCCATCTGGATGGTTAAATGGTGGTTTACAGGATATTGGGTTAGACCAATTTAATCTTGGAGTTCTGTGCTTGATAGGGAACTGCATTTGCATGGCTGCATTTCTAGCCATTCAGGCACCAGTATTGCAAAAATATCCTGCAAACCTATCTGTCACAGCATGTTCATACTTCTTCGGAGCTGTGTTGATGGTGACAGTGTCATTATTCTTGACTAACGAGTCAACTGACTGGAGTTTGACGTCATCAGAAATACTTGCCGTTTTTTATGCCGGAACTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCTATGGTTGCCCTTTACAATCCGCTTCAACCTGCGTTTTCTGCCATCCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGGGGAGCTTTTATCATTGTGGGTCTATATATAGTTACTTGGGGATCTTATAGAGGAAGACAAGCAACACTTGGAGTTCCTCCTCATGGATCTTGGGTCTCTGAACCACTTATTCATGAAAGAAGTGCAGACCAGAGAGTTCACATTTTCTCGGGGCCCTCCAGCGTATCCCCAAACCCAAAGCCATCTGATTAA 942 0.4246 MSFFVLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAILMVLYRGPALIGNAEIDHVTQNEISARGQPEPSGWLNGGLQDIGLDQFNLGVLCLIGNCICMAAFLAIQAPVLQKYPANLSVTACSYFFGAVLMVTVSLFLTNESTDWSLTSSEILAVFYAGTIASALNYGLITWCNKILGPAMVALYNPLQPAFSAILSQIFLGSPIYLGSIIGGAFIIVGLYIVTWGSYRGRQATLGVPPHGSWVSEPLIHERSADQRVHIFSGPSSVSPNPKPSD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2121 313 PANTHER WAT1-RELATED PROTEIN 1 303 IPR030184 GO:0016021|GO:0022857
Ssu2g2121 313 Pfam EamA-like transporter family 125 262 IPR000620 GO:0016020|GO:0016021
Ssu2g2121 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 80 - -
Ssu2g2121 313 PANTHER WAT1-RELATED PROTEIN 1 303 - -
Ssu2g2121 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 165 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2121 Ssu-Chr2 76794251 76798015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2121 20 294 Nodulin-like Gene Family AT5G45370 61.649 1.07e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2121 - - gmx:100787738 538.11