Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2120 ATGGCAGCAGTGGGATTGGGGGGTGACATATGGAAGGCCCACTTGGCCATGGCGCTGGTGCAGCTATTCAACGGCGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCGTCAACCAGTTAGTCTTCTGTGTCTTCCGTGATCTCCTTGCCCTTGCCATCCTTGCACCCCTTGCTTATTTCCGTGAAAAGTATGCTCCTTTTGTCCTTTTTTGGGCTTTGCTTTCTCTCGctctttattatttctttcaaatcaacTATTGGAGATGGTACttgtattgtttttcaaaagCTATAGTTATGCACCCTTTTGTTCTCTTGATGCAATTGAAAGGGATTCCTCGCTCACACCTTGACCTTTGCCTTTCACGGGCTTTTTGA 384 0.4349 MAAVGLGGDIWKAHLAMALVQLFNGGYHVITKVALNVGVNQLVFCVFRDLLALAILAPLAYFREKYAPFVLFWALLSLALYYFFQINYWRWYLYCFSKAIVMHPFVLLMQLKGIPRSHLDLCLSRAF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2120 127 PANTHER WAT1-RELATED PROTEIN 11 76 - -
Ssu2g2120 127 PANTHER WAT1-RELATED PROTEIN 11 76 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2120 Ssu-Chr2 76793327 76793710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2120 9 65 Nodulin-like Gene Family AT3G45870 84.211 2.36e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2120 - - gmx:100787738 112.464