Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2106 ATGGAACTAAGCACCATGTTTTGCCTGTGtgcttcttttctcttcattgtTCTGTTTAGGACACTTATCAAACCCTTTGTCTCCAAACGCCGTGACTTGCCACTCCCTCCTGGCTCCATGGGCTGGCCTTACATAGGAGAAACTTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTtgccacaaaaataaaaagGTATGGCTCTATGTTCAAGTCCCACATTCTAGGATGTCCCTGCGTGATGATTTCCAGCCCCGACGCTGCGAAGTTTGTGCTCAACAAAGCTCAACTGTTCAAGCCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGGAGGCTTGTTCTTCGCACCTTCATGCCCGAAGCCATCAAAAACATCGTCCCTGACATTGAATCCATCGCCCAAGATTGCCTCAAATCATGGGAAGGCCGTTCAATCACCACTTTCCTTGAAATGAAAACGTTCACCTTCAATGTTGCTCTGCTTTCGATTTTTGGGAAAGAAGAAATTCTGTACAGAGATGCTCTGAAACGGTGCTACTACACTCTGGAGCAAGGGTACAACTCAATGCCCATCAACGTTCTGGGGACACTGTTCCACAAAGCGATGAAGGCAAGGAAGGAGCTTGCACAGATCTTGGCCCAAATAATCTCGAGCAGGAGGCAGAGGAAGCAAGATTACAAGGACTTGTTGGGTTCATTCATGGGTGAGAAAGCAGGGCTCACCGACGAGCAGATAGCAGATAATGTAATTGGCCTCATATTTGCAGCTCGTGACACCACGGCCAGTGTGCTGACGTGGATCGTCAAGTACCTTGGTGAAAACCCCAGTGTCCTAGAAGCTGTTACTGAGGAGCAAGAGTGCATATTGAAGAGCAAGGAAGAAAGTGGAAAAGATAAGGGTCTGAATTGGGAAGATGCCAAAAAGATGCCAATAACTTCAAGGGTTATTCAGGAGACTCTAAGAGTTGCTtcaattttgtcttttactttCAGAGAAGCAGTAGAGGATGTTGAATATCAAGGTCAATAA 1083 0.4386 MELSTMFCLCASFLFIVLFRTLIKPFVSKRRDLPLPPGSMGWPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISSPDAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDCLKSWEGRSITTFLEMKTFTFNVALLSIFGKEEILYRDALKRCYYTLEQGYNSMPINVLGTLFHKAMKARKELAQILAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGLIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKSKEESGKDKGLNWEDAKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2106 360 Gene3D Cytochrome P450 26 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 SUPERFAMILY Cytochrome P450 29 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PANTHER CYTOCHROME P450 26 11 359 - -
Ssu2g2106 360 Pfam Cytochrome P450 36 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2106 360 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2106 Ssu-Chr2 76523454 76525047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2106 1 359 Cytochrome P450 AT4G19230 73.151 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2106 K09843 - gmx:100170674 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2106 2 76523454 76525047 Ssu2g2106 2 76523454 76525047 ECH