Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2085 ATGGAGCGACTAGTTCGTCAAAGGGTGATGGAATACACAAAAGAATACATATACAGGGCCATGGGCACTaactcTAATGGCAATATGGTACTAAAGCAAGTAATTGACATGAACACAAGATTAATAACGAATGCATGCCGAATGTCTCTCCTagaaaCCATCACCCTCCACTGGCTCTCATTAACAAACCTTCTTCAAAGTACCACCACCTGGTTTCCCCAACCCATTCTCCATCTCAGAATGGAGAATGCAATAATAAGGCAGTGGTTGAACCTTCTGGGGTGTGCACTGTTGTTGCTGATAGCAGAAGCTTCTTATGTACCAATCACTTATGTTCAGAACGCGGTAACAAAAGGAGCCGTTTGTTTGGATGGGAGTCCACCGGCTTACCATTTTGATAAGGGATTTGGAACAGGGATTAACAATTGGTTAGTTGCATTTGAGGGAGGAGGATGGTGCAACAATGTTACCACTTGCCTCTCTCGCAAGACCAATCGTTTAGGTTCTTCTAAGAAAATGGCCAGGCAAATTGCCTTTTCAGGAATTTTGAACAACAGGCGACTGTTTAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCATTTACTGGTGATGTGGAAGCAGTGAATCCAGTAACTAAGTTGCACTTCAGAGGAGCAAGGATTTTCGCTGCTGTCATGGAAGAATTACTAGcaaaaggaatgaaaaatgCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTAACTTCAGTACTGCATTGTGATCGCTTCCGAGCTCTATTACCTAGAGGGGCTAGAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAATGCAAGGGATGTCTCTGGAGCACTACACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATgGCTCTGCAAGGAACTTGCCTCAATCATGCACTTCGAGACTTAGTCCAGGGCTGTGCTTTTTCCCACAATATTTGGTGTCACATATCACTACGCCAATCTTCTTTGTAAACGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCAAGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCACCTGATGAACTCGATCTAATGCAAGGCTTCAGAACAGAATTCTTAAGGGCATTGACAGTGCTAGGTAACACTTCATCTAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGTCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCTCCAGTGCTGAACAAGACAACAATTGCAAGGGCTGTAGCAGACTGGTTTTACGAAAGAAGGCCCTTCCATCAGATAGATTGCCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTCGAACCACAAGACAACCACCCAGGAGTATAg 1443 0.431 MERLVRQRVMEYTKEYIYRAMGTNSNGNMVLKQVIDMNTRLITNACRMSLLETITLHWLSLTNLLQSTTTWFPQPILHLRMENAIIRQWLNLLGCALLLLIAEASYVPITYVQNAVTKGAVCLDGSPPAYHFDKGFGTGINNWLVAFEGGGWCNNVTTCLSRKTNRLGSSKKMARQIAFSGILNNRRLFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVMEELLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPRGARVKCLSDAGYFINARDVSGALHIEQYFSQVVATHGSARNLPQSCTSRLSPGLCFFPQYLVSHITTPIFFVNAAYDSWQIKNILAPGVADPQGHWHSCKLDINNCSPDELDLMQGFRTEFLRALTVLGNTSSKGMFIDSCYAHCQTEMQETWLRSDSPVLNKTTIARAVADWFYERRPFHQIDCPYPCNPTCHNRVFEPQDNHPGV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2085 480 Pfam Pectinacetylesterase 102 451 IPR004963 GO:0016787
Ssu2g2085 480 SUPERFAMILY alpha/beta-Hydrolases 223 352 IPR029058 -
Ssu2g2085 480 PANTHER NOTUM-RELATED 84 474 IPR004963 GO:0016787
Ssu2g2085 480 PANTHER PECTIN ACETYLESTERASE 84 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2085 Ssu-Chr2 75906318 75928181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2085 86 478 Carbohydrate Esterase AT4G19420 61.916 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2085 K19882 - gmx:100776478 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2085 2 75906318 75928181 Ssu2g2085 2 75906318 75928181 ECH