Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2076 ATGGGCATTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTATATTCTGCCGATACTTATTGTAGTCTATAAAGCCGAAGCAATCACTCCCGATGGTGAGGTGCTTCTCAGCTTTAGGATAGCAGTTGTTAGTTCTGATGGTATCCTGTTACAGTGGAGGCCCGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCGAAAACCAAGAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGTGGGTCTATATCACCTGACCTTGGGAAGCTAGAGAATCTGAGGGTTCtTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGCATTGGGAAACTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTCAGTGGGAATATTCCTGCATCACTTGGGAAGTTGtataatctcaaaaatttCAATGTATCAACCAATTTTCTGGTCGGACCTATACCTTCTGATGGTGTCCTTGCCAACTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGAGTGAAAATCAATTCAACATGTAAAGATGATGGTTCGCCTGAGACAAATACTCAATCTACTTCCTCAGaccaaaatcaatttggaaAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTCCTTTATAAGAAGTTTGGTAAAAACGACAGAATAAGTCTGGCAATGGATGTTGGTACAGGTGCATCAATCGTGATGTTTCATGGAGACCTACCATATTCCTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGCATAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATCGTAAAGTTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTAAGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTAGCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCAAGCAACATTTTGCTTGATGGAAACTTGGAAGCTCGGGTCTCTGATTTTGGACTTGCCAAACTGCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGAGTGATGTGTATAGCTTTGGTGTGCTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGATGCAGCATTCATTGAAAAGGGTCTCAATATTGTCGGTTGGttgaattttctaattactGAAAATAAGCCAAGGGAAATTGTTGACCCACTATGTGAAGGGGTGCAAGTGGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCACTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCACCGAGTGGTCCAATTGCTTGAATCAGAGGTCGTAACTCCATGCCCCAGTGACTTCTATGACTCCAACTCCGATTAG 1788 0.4144 MGICLLKWQWPWLLYILPILIVVYKAEAITPDGEVLLSFRIAVVSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLENLRVLALHNNNFYGTIPSALGNCTELEGIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPSDGVLANFTGSSFVGNRGLCGVKINSTCKDDGSPETNTQSTSSDQNQFGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGTGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLAGGSLDEALHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENKPREIVDPLCEGVQVESLDALLSVAIHCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2076 595 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2076 595 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Ssu2g2076 595 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Ssu2g2076 595 Gene3D Phosphorylase Kinase; domain 1 282 385 - -
Ssu2g2076 595 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
Ssu2g2076 595 SUPERFAMILY L domain-like 31 195 - -
Ssu2g2076 595 SUPERFAMILY Protein kinase-like (PK-like) 293 577 IPR011009 -
Ssu2g2076 595 PANTHER RECEPTOR-LIKE PROTEIN 55 3 595 - -
Ssu2g2076 595 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2076 595 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Ssu2g2076 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Ssu2g2076 595 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2076 595 Gene3D Transferase(Phosphotransferase) domain 1 386 583 - -
Ssu2g2076 595 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 595 IPR031071 GO:0004672|GO:0005524|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2076 Ssu-Chr2 75625937 75637211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2076 1 586 Receptor kinase-like Gene Family AT2G35620 75.768 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Ssu2g2076 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2076 - - gmx:100819230 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2076 2 75625937 75637211 Ssu2g2076 2 75625937 75637211 ECH