Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2063 ATGTCCCTCCTCAGCCGATTCTTCTACAAGCGTCCCCCAGACGGCTTGCTCGAATTCACCGACCGAGTCTACGTCTTCGATTCCTGCTTCTCCACCGAAGCATTGCCCGACGGAATGTACCAACTCTACCTCCGCCAAATCCTCGCCGACCTCCACGAGGACTTTCCGGAATCCTCCTTCCTCGCCCTCAATTTCCGCGACGGCGAGAGCCGCAGCCGCTTCGCCCGCGTCCTCTGCGACCTCGACGCCACCGTCATCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTTCTCCCGCTCTCTCTGATCCACCACTTCCTCCGCGTCTGCGACACTTGGCTCAGCGACCACAGCAACCTGATTCTGTTTCACTGCGAGCGAGGGGGCTGGCCCCTCTTGGCGTTTTTGCTCTCTAGTTTCCTCGTTTTCCGGAGGGTGCAGAGCGGGGAGCGGAGGACGCTCGAGATGGTCCACAGGGAGGCGCCGAAGGGGCTGTTGCAGCTGTTGTCGGCGCTGAACCCGTTGCCTTCGCAGCTTCGGTATGTTCAGTACGTGGCGCGGAGGAACATTGGGGCGGAGTGGCCCCCGCCGGAGAGGGCTCTCTCTCTGGACTGTGTTATTCTCAGAGGTGTTCCCGGGTTTGACGGTGGCAACGGCTGCAGGCCGTTGTTTAGGATTTTTGGAAGGAATTTGCTTAGTAAAGGGGGGCTTTCCACCCAGATGATTTATAACATgcataagaagaagaaaagtttgAGGCATTATCGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGGGATGTGGTGTTGGAGTGTGTGCATTTGGATTTGGAGAGGGAAGTGATGATGTTTAGGGTGATGTTCAACACGGCATTTATTCGGTCTAACATATTGATGTTGACTGCTGAGAATTTGGACATTCTTTGGGATTCCAAGGAGCGGTATCCGAAGGGATTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATGAGTCCCCCAAGGGCTCAAACAACTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGTGATGCTGCTGCTGTCTGGCTGCTCAAACAGCTTACAGTCTTAAATGATGCCAAAGAGCTTTCAAGGTTTCAAGGTAGAGGAGGTTGGTATTCATCACCTGTTGACtctgaagaagaaaataatgaatcGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAGGTCTTCTGCTGATCCTTCGAAATTATTGACATCTGACACCCCTGATTTGGTCCATTTAGCTTTTGAGAACATTGGTGGAGATTATGTAAATCTCACTCCAAGAACACCTGATCAGTTATTGACTTATAATATTTCATCACCTCATCATGCTCTGAGTAAGGAATATTCTCCTTGTTTGTCTCCACTATTGCCTTCACCAGTTCCCGCTACTCAACCTCTTCCAACACtagcactgccaccaccatctcCACCAACGTCTAATGAATGGGCCCCTTTAGCTCCACCTCCACATCCGATAGTTCATAATGCGAACAATGCTTCTACATTGTTTTCACCACCTCCTCCTCCCCCTCCCCCTCCTCCTTCTATAGGTTGCAATGCCGATAGTGTTCCTTgtccacctccacctcctcctccagGTCATGTACAAACAAGTTCAGCTTCAGCCCCACCGCCTCTGCCTCTTCCTCTAGATCATGTCCAAACAGGTTCAACCCCACCGCCTCCCCCTCCTCCTCCAGGTCCTGTTCAAACAGGTTCAGCCCCACCACCACCGCCTCCAGGTCCTACACGAACAAGTTCGaccccaccaccacctccacctcctccaGGTCCTTTACGAACAGGTTCTGCCCCTccaccacctccacctcctcctGGTCCTGTACGAACAGGTTCagcaccaccaccgccacctcctcctcctcctcttcctccaGGTCCTGTACGAACGGGTTCAGCCccaccacctccacctcctcctcctcttcctccaGGTCCTGTACGAATGGATTTAGccccaccaccacctccacctccacctcctccgGGTCCTGTAAGAATGGGTTCAGCCCCACCACCTCCCCCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGccccacctccacctccacctcctccaGGTCCTGTAAGAATGGGTTCAGCCccaccacctccacctcctcctccagGTCCTATACGAACGGGTTCAGCCccaccacctccacctccacctccacctccacctcctccaGGTCCTGTACGAACAGGTTCAGCCCCGCCACCACCTCCACCTCTTCCAGGTTCTGTGCGAACAGGTTCAGCCccaccacctcctcctcctcctctaggTCCTGTACGAACAGCTTCAGCCCCACCGccacctccacctcctccaGGTCCTGTACGAGCGAGTTCAGCCCCATCACCTCCGCCTCCTCCTCCAGTTCCTGTAAGAACTGGTTCAGCCccaccacctccacctcctccaGGATCTGCACGAACTGGTTCAGCCCCACCACCTCCTCCTCCCCCAAGTGTACGAACAGGTTCagctccaccaccaccaccaccgacacCAAAGCCTCCAAGTGCCCCTCCTCCTCCACCTGGCCGTGGTGCATCACCAGTGCCACCTCCACCTCCTGCAGCTAGGGCCCCTGGTGTGGCACCACCACCAGGCAAAGCTTTAACAACAAATGTTGGAAGAGGTCGTGGTACTGCTAATGCTCCTAAAAAAACTTTGCTAAAACCCCTACATTGGGTGAAAGTTGCTCGAGCAACCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGAAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGTACTAAAGGTGGAGGTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCtctctaaaatcaaaattccttTGCCAGATATGCTTAAAGCAGTCTTGGCATTGGATTCTTCAGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAGGAATTATACAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGTGTGGAATCCAAATTAAGggtttttgcttttaaaataaccTTTTCTTCTCAGgTGAACGATTTGAAGTTAAATTTGAACACAATCAACAGTGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACACTGGGCAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCAGTAGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGcaagaaataacaaaatgacTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGTTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGATTGTAATATGGTTAGCAACTGCTAGCTATCATGTATCTAGGGAAGAAGTGCAGACTCTTGTCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAAGAAGTCAAGGGAGGAGAATGAAAGGCAGGCGGAtgttgaaaaaaagaaattagagaaaGAAGCCTTGAAGGAAAGGACAGCAAATAACTCACATTCCAAAAAAGATGCTGTTCGAAGAGTTGCTAGGGCTTGGAGAAAAGGGGGAAAACAACGTGTTGTGGCTAGGGTTTTGATTGTGAAGGGATTTGGAAGGATTTCTCATTGGTTGGTGTTTTTGGCATATGTGGATGTTTTGCAAGACATTATTATAGTAGtgaatttttattccattttgaaaaaattgaacTCGGTCAAAGTGGGTTTTTTCGGTCAAAATCGGGGTGGGTTCGGGGTGGGTACCCATGGGCATGAGTTTGTTTGCCATGCCTACCGTGAACATATTGTTGTGTCAACTCCTACGATTGCACATGTTGGGGTTGTGGAGGGAAATATCCATGTACGTACTCCTGGTGTTGGGAATTCGAGCATCATAGTCGCACTTAATGAGTCAAGGGGTTTGACTCTAGCGACGTTAAAGGTTGGGCTTCCCAACATCACTCCAGTGCAGATTCTCGAACCCAACAGGATGGGGTTTTTGGAGTTGTCTAAGCCTCTGGACTTAGGCAAGGCCAAGGCTCAACAGGAGGTTGGACAGTGCTCTTCCATGGGAGGTCACAATATAATGGAGTTAGGTGGAGGGGATGTTATGGTGGCAGAGAGTTTGCACGGACAGCCTACGTAG 4620 0.4335 MSLLSRFFYKRPPDGLLEFTDRVYVFDSCFSTEALPDGMYQLYLRQILADLHEDFPESSFLALNFRDGESRSRFARVLCDLDATVIDYPKQYEGCPLLPLSLIHHFLRVCDTWLSDHSNLILFHCERGGWPLLAFLLSSFLVFRRVQSGERRTLEMVHREAPKGLLQLLSALNPLPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLEREVMMFRVMFNTAFIRSNILMLTAENLDILWDSKERYPKGFRAEVLFGEVESMSPPRAQTTILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAVWLLKQLTVLNDAKELSRFQGRGGWYSSPVDSEEENNESSTADSSDEAFDVIPRSSADPSKLLTSDTPDLVHLAFENIGGDYVNLTPRTPDQLLTYNISSPHHALSKEYSPCLSPLLPSPVPATQPLPTLALPPPSPPTSNEWAPLAPPPHPIVHNANNASTLFSPPPPPPPPPPSIGCNADSVPCPPPPPPPGHVQTSSASAPPPLPLPLDHVQTGSTPPPPPPPPGPVQTGSAPPPPPPGPTRTSSTPPPPPPPPGPLRTGSAPPPPPPPPGPVRTGSAPPPPPPPPPLPPGPVRTGSAPPPPPPPPLPPGPVRMDLAPPPPPPPPPPGPVRMGSAPPPPPPPPGPVRTGSAPPPPPPPPGPVRMGSAPPPPPPPPGPIRTGSAPPPPPPPPPPPPPGPVRTGSAPPPPPPLPGSVRTGSAPPPPPPPLGPVRTASAPPPPPPPPGPVRASSAPSPPPPPPVPVRTGSAPPPPPPPGSARTGSAPPPPPPPSVRTGSAPPPPPPTPKPPSAPPPPPGRGASPVPPPPPAARAPGVAPPPGKALTTNVGRGRGTANAPKKTLLKPLHWVKVARATKGSLWADSQKQDSETRAPEIDISELESLFSAASTSDGSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSSVLDIDQVENLIKFCPTKEEMEMLRNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKLNLNTINSAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISTGFRKIVIWLATASYHVSREEVQTLVQYFGEDPARCPFEQVTQILVVFVKMFKKSREENERQADVEKKKLEKEALKERTANNSHSKKDAVRRVARAWRKGGKQRVVARVLIVKGFGRISHWLVFLAYVDVLQDIIIVVNFYSILKKLNSVKVGFFGQNRGGFGVGTHGHEFVCHAYREHIVVSTPTIAHVGVVEGNIHVRTPGVGNSSIIVALNESRGLTLATLKVGLPNITPVQILEPNRMGFLELSKPLDLGKAKAQQEVGQCSSMGGHNIMELGGGDVMVAESLHGQPT 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2063 1539 Coils Coil 1300 1325 - -
Ssu2g2063 1539 PANTHER FORMIN-J 868 1335 - -
Ssu2g2063 1539 PANTHER FORMIN-J 1 738 - -
Ssu2g2063 1539 Gene3D Formin, FH2 domain 934 1311 IPR042201 -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 987 1002 - -
Ssu2g2063 1539 Gene3D Protein tyrosine phosphatase superfamily 14 189 IPR029021 -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 505 533 - -
Ssu2g2063 1539 Coils Coil 1216 1243 - -
Ssu2g2063 1539 SMART it6_source 498 1389 IPR015425 -
Ssu2g2063 1539 SMART PTEN_C2_2 196 1063 IPR014020 -
Ssu2g2063 1539 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1010 1327 - -
Ssu2g2063 1539 Pfam C2 domain of PTEN tumour-suppressor protein 197 333 IPR014020 -
Ssu2g2063 1539 Pfam Formin Homology 2 Domain 940 1300 IPR015425 -
Ssu2g2063 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 335 IPR035892 -
Ssu2g2063 1539 Gene3D - 195 338 - -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 406 446 - -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 505 943 - -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 987 1010 - -
Ssu2g2063 1539 ProSiteProfiles Formin homology-2 (FH2) domain profile. 935 1325 IPR015425 -
Ssu2g2063 1539 MobiDBLite consensus disorder prediction 544 918 - -
Ssu2g2063 1539 ProSiteProfiles C2 tensin-type domain profile. 198 335 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2063 Ssu-Chr2 75309564 75326374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2063 900 1309 FH2 protein (formin) Gene Family AT1G31810 73.302 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2063 - - gmx:100809152 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2063 2 75309564 75326374 Ssu2g2063 2 75309564 75326374 ECH