Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2031 ATGGAGCAGATACCGGGCAAAGGAACAGGTCTCGTTGCAGCACAGCCCCTTAAGGCAGGCCAAATAGTCCTCACAGAATCCCCTCTCGTTCTCTACTCAGCTTCTCCTCTCTTCCCTGCACCCTCTTCTTCACCCTTCGCTAACTGTGACCACTGCTTCAGAATCTTACCCCCTCACACTCCCAACGTCCCATGCCCCTCTTGCTCCCACCACCTTTTCTGCTCCCACAAGTGCCTCTCCCTTTCACTCAAATCCTCATACTCTAGTTGGGCATGCAAAGCACTCGTGTCTCTTCTAAAACACCCCAACTCAACGCTACTTAAACAACAACCGCCAGAACGCCAAGTCCAAGCTCGTTTCGTAGTAGCATCTCACAACCTTTTCCTTCACTCCCCTTCTGAACTACACACTTTGCTTTCTCTGCATGGCACTCCGGATAATGCCATTCTTGATGCTGCTAAGGTTCTTCACTCTCTAATCTCACCCCTTTTCCCACCCCAGTTTCAGCTTTGTGTTGATCTCATAGCTCAACTTCTTGCAAAGGACAGACTCAACTCCTTTTGCTTAATGGACCCCTATTCCCCTGATGGGCCTCAGAGATCTATCAAAGCATATTCCATTTACCCCAAAGCAACGTTCTTCAACCATGACTGTGTTCCCAACGCGTGCAGTTTTGATTATGTGGACACTAGTGAACTCGGGGATGAACACAACACTGACATTGTTGTTAGGTTGATTGAGGATGTTCCTGAGGGGAAAGAGGTCTGCATTAGCTATTTCAGGATCGGAAGGGATTATTGTACGAGGAAAAGGATCTTGATGGAGGATTATGGGTTCACTTGTGGCTGTGATAGGTGCAAGATTGAAGCAAATTGGGGTGGCGGAGAAAACCAAGGAGAGAACAGTGACCTGCCACACGTGCGTTTTCTTTCCAAGTATGTTTGTGAGAGGAAGAATTGTGCAGGCACTATGGCTCCTCTGCCACCAAATGATGGTGCACCATCTAACGTTCTGGAGTGTAACTTCTGTGGTAATTTGAAGATTGATTGTGATACCGCTTAG 1062 0.4783 MEQIPGKGTGLVAAQPLKAGQIVLTESPLVLYSASPLFPAPSSSPFANCDHCFRILPPHTPNVPCPSCSHHLFCSHKCLSLSLKSSYSSWACKALVSLLKHPNSTLLKQQPPERQVQARFVVASHNLFLHSPSELHTLLSLHGTPDNAILDAAKVLHSLISPLFPPQFQLCVDLIAQLLAKDRLNSFCLMDPYSPDGPQRSIKAYSIYPKATFFNHDCVPNACSFDYVDTSELGDEHNTDIVVRLIEDVPEGKEVCISYFRIGRDYCTRKRILMEDYGFTCGCDRCKIEANWGGGENQGENSDLPHVRFLSKYVCERKNCAGTMAPLPPNDGAPSNVLECNFCGNLKIDCDTA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2031 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 350 - -
Ssu2g2031 353 Gene3D - 109 186 - -
Ssu2g2031 353 SMART set_7 1 266 IPR001214 GO:0005515
Ssu2g2031 353 Pfam SET domain 8 259 IPR001214 GO:0005515
Ssu2g2031 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 350 IPR044238 -
Ssu2g2031 353 CDD SET_SMYD 184 286 - -
Ssu2g2031 353 Gene3D - 48 108 - -
Ssu2g2031 353 ProSiteProfiles SET domain profile. 1 260 IPR001214 GO:0005515
Ssu2g2031 353 SUPERFAMILY SET domain 3 281 IPR046341 -
Ssu2g2031 353 Gene3D SET domain 10 287 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2031 Ssu-Chr2 73707350 73708411 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ssu2g2031 SET 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2031 - - gmx:100808530 540.421