Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2009 atggcaGATAGTTCAGTATCGTTTTTATTGGACAAGCTGACTTCCTTACTTCAAGAAGAAGTGAATCTGCAGAGAGGGGTTCGTGAAGATGTTCAGCACATCAAATATGAACTGGAACGCCACAAGGCCATCATAAGGGTGGCTGATTCTCTGGAAGACAAAGACCCTGAACTCAAAGCATGGGTTAAACGAGTGAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAACCTTCGCCTTGTTGATCAACATGGACAAGGCAACAATTCTtcttttcataactttttttccACCCTGAGAGCTCGGCATACGATTGCTTCAAATATACAAGGTATCAAATCCAGAGTGGACATTATATCCCAGGGACGTCCAACCTTACCTGGGATAGGCTCAGGCTCAAGTCAACGGTTGTCAACAAGGCTTGACAGCCAAGGAGATGCACTTCTGCTTGAAGAAGCTGATCTAGTGGGTATTGACAAACCCAAAAAGCAGCTTAGTGACTTGCTTTTCAATGACGAAGCAGGTAGGGCTGTGATTCCCATTTATGGAATGGGTGGGTTGGGAAAAACCACGTTGGCAAAACAAGTCTATGATGATCCAAAAGTGAAGAAGCGGTTCAGGATTCATGCTTGGGTTAATCTTTCTCAATCTTTCAAATTAGAAGAGCTCCTGAAAGACCTGGTTCAACAGCTCCATAATGTCATTGGCAAACCAGCTCCGGAAGCAGTTGGACAAATGAAAAGTGACAACCTCAAAGAGTTGATCAAGAGTTTGCTTCAGCGAAGCAGGTACCTCATTGTGCTGGATGATGTGTGGCATGTAAAGGTATGGGATTCTATCAAACTTGCTTTACCTAATAACAACCGTGGCAGTAGAGTAATGCTTACCACACGCAAGAAAGATATAGCTTTGTATTCCTGCGCTGAAATGGGTAAAGATTTTAACCTTGAATTCTTACCTGAGGAAGAAGCTTGGTATCTTTTCTGTAAGAAAACATTTCAGGGTAACCCATGCCCTCCTCATCTGGAGGAAGTTTGCAGGAATATCTTAAAAATGTGTGGGGGGTTGCCACTAGCAATTGTGGCAATTGGTGGAGCTTTGGCTACAAGAGGCAGGGCAAACATAGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAACGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTCAGTTTCAACGAGTTGCCTTACTATCTTAAATCCTGTCTGTTATACCTAAGCATCTTCCCTGAGTTTCATGCTATTGAGCACATGAGATTGATTCGCTTGTGGATAGCTGAAGGGTTTGTGAATGGAGAAGACGGAAGGACACTGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAATCTGCTCCAAGTGGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGCATGCATGATCTTATAAGGGAGATTGTCAATTTGAAGGCAAAGGATCAGAACTTAGCAACAATAGCCAAAGACCAAGATATAATCTGGCCAGACAAAGTTCGACGCCTATCAATCATAAACACATTGTATAATGTGCAACAAAATAGGACTGCATTCCAACTTCGGTCTCTGCTAATGTTTGCCTTATCAGATTCACTCGAGCACTTTTCTTTACGTGCATTATGTTCCACTGGTTATAAGTTACTCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGCCTTTACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAGCAGTTGGAGACATTAGATCTTAAACACTCCTGTGTCACTGAACTGCCAGTTGAAATTGTGGAGCTGCAACGATTACGCCATCTCTTGGTGTATCGATATGAGATTGAATCCTATGCTTATTTCCATTCAAGGCATGGCTTCAAGGTGGCTGCCCCAATAGGACTTATGCAATCTTTGCAAAAGCTATGTTTCGTAGAGGCAGACCATGCTTTGATGATTGAGCTAGGAAAACTGACTCAACTCAGGAGGCTTGGCATTAGAAAGTTGAGGCAACAAGATGGGGCTGCTTTGTGTTCATCTATTGAGAAGATGATCAATCTCCGCTCATTGTCCATAACTGCAATTGAAGATGATGAGATTATTGATATTCACAACATTTCCAGGCCTCCTCAGTATCTCCAGCAGTTATACTTGGGTGGACGTTTAGACAAGTTTCCCCACTGGATAAGTTCTCTCAAGAATCTGGTCCGAGTGTTTCTAAAATGGAGCCGGTTAAAGGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTAAGACATCTTGAGTTTCTTCAAGTTTATGTTGGTGAGACATTGCATTTCAAGGCTAACGGGTTTCCTAGTCTGAAGGTGTTAGGCCTTGATGATTTGGATGGACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTAATTTATTCAAGCAGGTACCATTAGGCATTGAACACCTAATCAAACTGAAAACAATAGAGTTTTTTGATATGCCTGAAGAATTGATTACTGCACTGCGTCCAAGTGGAGGTGAGGATTATTGGAGAGTACAACATGTCCCAGCAGTTTATTCCTCATATTGGAGGGATGGTGGTTGGGATGTCTACTCCTTAGAGACTTTAGGAGACAGAGAGAGTGATTCCAGTCGCGGTACGGCAATGAGAAATCTTGAAATTTGCACACTCTGGAAGGTTTAA 2820 0.4245 MADSSVSFLLDKLTSLLQEEVNLQRGVREDVQHIKYELERHKAIIRVADSLEDKDPELKAWVKRVRDVAHDMEDAIDEFNLRLVDQHGQGNNSSFHNFFSTLRARHTIASNIQGIKSRVDIISQGRPTLPGIGSGSSQRLSTRLDSQGDALLLEEADLVGIDKPKKQLSDLLFNDEAGRAVIPIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNLSQSFKLEELLKDLVQQLHNVIGKPAPEAVGQMKSDNLKELIKSLLQRSRYLIVLDDVWHVKVWDSIKLALPNNNRGSRVMLTTRKKDIALYSCAEMGKDFNLEFLPEEEAWYLFCKKTFQGNPCPPHLEEVCRNILKMCGGLPLAIVAIGGALATRGRANIEEWQMVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGRTLEEVADSYLKELLDRNLLQVVAKTSDGRMKTCRMHDLIREIVNLKAKDQNLATIAKDQDIIWPDKVRRLSIINTLYNVQQNRTAFQLRSLLMFALSDSLEHFSLRALCSTGYKLLRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGSIKKLQQLETLDLKHSCVTELPVEIVELQRLRHLLVYRYEIESYAYFHSRHGFKVAAPIGLMQSLQKLCFVEADHALMIELGKLTQLRRLGIRKLRQQDGAALCSSIEKMINLRSLSITAIEDDEIIDIHNISRPPQYLQQLYLGGRLDKFPHWISSLKNLVRVFLKWSRLKEDPLVHLQDLPNLRHLEFLQVYVGETLHFKANGFPSLKVLGLDDLDGLKSMTVEEGAMPGLKKLIIQRCNLFKQVPLGIEHLIKLKTIEFFDMPEELITALRPSGGEDYWRVQHVPAVYSSYWRDGGWDVYSLETLGDRESDSSRGTAMRNLEICTLWKV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2009 939 Gene3D - 321 408 IPR042197 -
Ssu2g2009 939 Gene3D Ribonuclease Inhibitor 531 883 IPR032675 -
Ssu2g2009 939 Gene3D - 5 109 - -
Ssu2g2009 939 Gene3D - 409 499 IPR036388 -
Ssu2g2009 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 423 IPR027417 -
Ssu2g2009 939 SUPERFAMILY L domain-like 487 875 - -
Ssu2g2009 939 Gene3D - 147 312 IPR027417 -
Ssu2g2009 939 Pfam Rx N-terminal domain 6 95 IPR041118 -
Ssu2g2009 939 PANTHER OS08G0539900 PROTEIN 1 138 - -
Ssu2g2009 939 PANTHER OS08G0539900 PROTEIN 152 901 - -
Ssu2g2009 939 PRINTS Disease resistance protein signature 261 275 - -
Ssu2g2009 939 PRINTS Disease resistance protein signature 356 370 - -
Ssu2g2009 939 PRINTS Disease resistance protein signature 181 196 - -
Ssu2g2009 939 PRINTS Disease resistance protein signature 610 626 - -
Ssu2g2009 939 Pfam NB-ARC domain 163 410 IPR002182 GO:0043531
Ssu2g2009 939 PANTHER DISEASE RESISTANCE PROTEIN RP 1 138 IPR044974 GO:0006952
Ssu2g2009 939 PANTHER DISEASE RESISTANCE PROTEIN RP 152 901 IPR044974 GO:0006952
Ssu2g2009 939 CDD RX-CC_like 2 123 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2009 Ssu-Chr2 73383153 73385972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2009 181 623 WRKY Transcription Factor Family AT5G45050 21.166 1.28e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2009 K13457 - gmx:100305458 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2009 2 73383153 73385972 Ssu2g2009 2 73383153 73385972 ECH