Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1940 ATGGCAATTGAAAACCAAGACACCACTGTCAGAGAAATCAAGCCCAAAAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCATGGTTGAAGCCACTGCTCAAAGAGCGATTCTTTGTTCAATGCAACTTACATGCTGATTCTCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATGAACGGACCTCTCTGCTCTCTCTGCCTCGCCCACCACAAGGATCATCGTGCCATCCAGATTAGGAGGTCCTCGTACCATGATGTGATCAGAGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAGACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGGCCTCAACCAAGGCCAGGGAAAGGGGTCACAAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGGTATTAAGTTTACCACCAATGTCTTTCATTCATTGTTTAAGCTTTTGA 525 0.4705 MAIENQDTTVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKERFFVQCNLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKVLSLPPMSFIHCLSF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1940 174 Pfam PLATZ transcription factor 89 160 IPR006734 -
Ssu2g1940 174 PANTHER BNAC08G11100D PROTEIN 1 160 - -
Ssu2g1940 174 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1940 Ssu-Chr2 71896321 71897459 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu2g1940 PLATZ 2.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1940 - - gmx:100797900 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1940 2 71896321 71897459 Ssu2g1940 2 71896321 71897459 ECH