Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g1895 | ATGGATCCGATTCAATCGAACGACGGCGTTCAGAAATACCCTCAAACCCTAATCTCTGAGCCTAAAGATTCTCTAATGCAAGACGCCAACGAGTCCTTGTTCGATTCGATGGTTTGTGACTCCACTTCAAGACTGATCCCAACTGGGTTTACCAGATCTGACAACGCAGATGAGGAGTGTCTCATGTTTGTAAACGCGGGAGGGGATGCTTTTAGTGAAGCAGCAGGTGGAATAACGTTCCTGGGTGACACCTATTTTGATGGTGGCAACATTATGCGTACCAATGAGCAAATAGTAGAGGGTGGAGACTATCCATTTATCTATCAATCAGCTCGGTTGGGAAGCTTTTGTTATAGGTTTGATAATCTTCCCCCTGGAGATTATGTTGTCGATCTTCATTTTGCAGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGcAGGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGCCAATAAGCCACTACAGTTGGTTGATTCAAGGGTGTCTGTGAAGGATGATGGGTTAATTCTCATAAGGTTTGAAAGTATAACTGGGAGCCCAGTCGTTAGTGGGATTTGCATTAGGAGAGCAACGAAGGCATTAGtTTCACAAGTGACAAGTGATTACATTAAATGTAGCTACTGTACTGCACAGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGGCAAAGTCTACAGCAAAGTACGAGAATAAGATAAAGGAGCTCACAATGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCACTAACTGCAACAAATGAGCAATTGGAGGCAGTCCAGATGGAACTTGACAAAGTGACATTTAAGTCACTCACTACTGATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAGGAATATTTCTAATAGGTATGAGCTTGATAGGAAGAAATGGACAGAAGCAATTAACAGTTTACAGgaaaaaataaagTTGATGAAGAGTGATTATTCAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCTgagttaaataatatggttttTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGatgacaaaaagaaagaaactctTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGTCGATGTCGTCCATTGCATAAGGCTGAAATCTCAGCTGGGTGCAATACAGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAGTTTTGACAAGTGGCTCCACCAAAAAATCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACAGAGCAGAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAATTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGCTTGAGGTTTACAATGAACAAATCAGAGACTTATTGGCTACAGGACAAACATCAAAAAgGTTGGAGATAAAACAAGCTTTTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGATTGATAACATAAATGAAGTGTGGAATGTACTGCAGACCGGAATTAATGCTAGAGCAGTTGGAAGTAATAACCTTAACGAGCATAGCAGTCGATCTCACTGcatgctttgtatAACAGTAAAGGCTAAAAATTTGTTGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGATAAGACTAAAGCGGATGGGGAACGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCCCTTGGAGATGTAATATCCGCTTTAGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTGACGCATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACCTTGATGTTTGTACAAATTAGTCCATCAGACCAGGACGTAGGTGAGACACTGAGTTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGATGAAAGCAATGCTTGAAAAAGCTCGGAGTGAGTGCAGAATTAAAGATGAATCTATGCgaaaacttgaagaaaatttGCAAAGCATGGAGAGTAAGGCCAAAGGCAAGGATCAAATTTACAGAAATCTACaagaaaagattaaagaacTTGAGGGACAGATTGAGTTGAAAAAAGCCATGCAAAATGAGTCAGAGAAACAAATCTCTCAATTATCTGACAAATTGAGAGGGAAAGAAGAAACCTGCAGTACTCTTCAACAAAAGGTGAAAGAGCtagagaaaaagatgaaagaacaACTGCAGTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGACCTAGAGAAAAAGCTGAAAGATCAGATGCAAGCGTCTGAGTCTGAATCTGCCATTTTGAAAGATAAGATCAAGGAGCTTGAGAGAAACCTGAAAGAGCAGGAACAGAGCTCAATGTCCTTGCTTCGTCAACAGATGAAGGAACTGGAGAACAGGTACAGAGAGCGTGAGCAACAATGGCAACAAACTCATTGTTTTGTGGATGCAGTAAAGGCCACACCTGAGGTAGGTAAAAGCTGCATGAGTGAAGAATGTCCTAGCGAGATTGAGGCTGGCATTTTAAGGTGTTCAAACTCAGTAAACCGCCAGATAAGTCAAGGTTCTTCTTTGTTCAAAGGGAATGATTCCACTCATCAGATAAGAAGCAAAAGAGAGTTTAGAAGCAATGATGAAAACAACTTTGTTATGTCATCATCATTACACGATAGAAAAGTCACAAGGAAATCTGATCCCCCTAAAATAGTGCGGGGTGGGAGGCCAACTCCAAGACCAGTCATTGCTAATCAAGCTCCAGTGTCTCACAAGAGAGCTAGCACAAGCAGGGATCAGGTTCAAGGAATCAGAGAGAGGGACAGTAAGAAGAAAATTTGGTCAAGATAG | 3153 | 0.3942 | MDPIQSNDGVQKYPQTLISEPKDSLMQDANESLFDSMVCDSTSRLIPTGFTRSDNADEECLMFVNAGGDAFSEAAGGITFLGDTYFDGGNIMRTNEQIVEGGDYPFIYQSARLGSFCYRFDNLPPGDYVVDLHFAEIINTNGPKGMRVFNVYIQDEKQVLSELDIYAVVGANKPLQLVDSRVSVKDDGLILIRFESITGSPVVSGICIRRATKALVSQVTSDYIKCSYCTAQIEIPSSQMKVMQAKSTAKYENKIKELTMQCELKAKECYEAWMSLTATNEQLEAVQMELDKVTFKSLTTDQTVEKQAESLRNISNRYELDRKKWTEAINSLQEKIKLMKSDYSKLSFEAHECVDSIPELNNMVFAVQELVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFCRCRPLHKAEISAGCNTVVDFDAAKDGCLGVLTSGSTKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKISKERSETFSYDISVSVLEVYNEQIRDLLATGQTSKRLEIKQAFEGFHHVPGVVEAKIDNINEVWNVLQTGINARAVGSNNLNEHSSRSHCMLCITVKAKNLLNGECTKSKLWLVDLAGSERLDKTKADGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKMKAMLEKARSECRIKDESMRKLEENLQSMESKAKGKDQIYRNLQEKIKELEGQIELKKAMQNESEKQISQLSDKLRGKEETCSTLQQKVKELEKKMKEQLQSESASFQQKVWDLEKKLKDQMQASESESAILKDKIKELERNLKEQEQSSMSLLRQQMKELENRYREREQQWQQTHCFVDAVKATPEVGKSCMSEECPSEIEAGILRCSNSVNRQISQGSSLFKGNDSTHQIRSKREFRSNDENNFVMSSSLHDRKVTRKSDPPKIVRGGRPTPRPVIANQAPVSHKRASTSRDQVQGIRERDSKKKIWSR | 1050 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g1895 | 1050 | MobiDBLite | consensus disorder prediction | 1032 | 1050 | - | - | |
Ssu2g1895 | 1050 | MobiDBLite | consensus disorder prediction | 988 | 1050 | - | - | |
Ssu2g1895 | 1050 | CDD | KISc_C_terminal | 399 | 725 | - | - | |
Ssu2g1895 | 1050 | ProSiteProfiles | Kinesin motor domain profile. | 401 | 723 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | ProSitePatterns | Kinesin motor domain signature. | 623 | 634 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Ssu2g1895 | 1050 | Gene3D | - | 56 | 213 | - | - | |
Ssu2g1895 | 1050 | SUPERFAMILY | Tropomyosin | 734 | 916 | - | - | |
Ssu2g1895 | 1050 | Pfam | Malectin domain | 62 | 206 | IPR021720 | - | |
Ssu2g1895 | 1050 | Coils | Coil | 744 | 910 | - | - | |
Ssu2g1895 | 1050 | Coils | Coil | 367 | 401 | - | - | |
Ssu2g1895 | 1050 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 28 | 1036 | - | - | |
Ssu2g1895 | 1050 | Gene3D | Kinesin motor domain | 346 | 724 | IPR036961 | - | |
Ssu2g1895 | 1050 | Gene3D | - | 725 | 890 | - | - | |
Ssu2g1895 | 1050 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Ssu2g1895 | 1050 | SMART | kinesin_4 | 399 | 731 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | Coils | Coil | 315 | 342 | - | - | |
Ssu2g1895 | 1050 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 401 | 759 | IPR027417 | - | |
Ssu2g1895 | 1050 | Pfam | Kinesin motor domain | 407 | 722 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | PRINTS | Kinesin heavy chain signature | 673 | 694 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | PRINTS | Kinesin heavy chain signature | 593 | 610 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | PRINTS | Kinesin heavy chain signature | 624 | 642 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | PRINTS | Kinesin heavy chain signature | 475 | 496 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Ssu2g1895 | 1050 | PANTHER | KINESIN-LIKE PROTEIN KIN-14R | 28 | 1036 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g1895 | Ssu-Chr2 | 70716298 | 70722256 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g1895 | 373 | 777 | Calmodulin-binding Proteins | AT5G65930 | 40.488 | 6.15e-84 | 295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g1895 | K10406 | - | gmx:100800016 | 1867.82 |