Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1895 ATGGATCCGATTCAATCGAACGACGGCGTTCAGAAATACCCTCAAACCCTAATCTCTGAGCCTAAAGATTCTCTAATGCAAGACGCCAACGAGTCCTTGTTCGATTCGATGGTTTGTGACTCCACTTCAAGACTGATCCCAACTGGGTTTACCAGATCTGACAACGCAGATGAGGAGTGTCTCATGTTTGTAAACGCGGGAGGGGATGCTTTTAGTGAAGCAGCAGGTGGAATAACGTTCCTGGGTGACACCTATTTTGATGGTGGCAACATTATGCGTACCAATGAGCAAATAGTAGAGGGTGGAGACTATCCATTTATCTATCAATCAGCTCGGTTGGGAAGCTTTTGTTATAGGTTTGATAATCTTCCCCCTGGAGATTATGTTGTCGATCTTCATTTTGCAGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGcAGGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGCCAATAAGCCACTACAGTTGGTTGATTCAAGGGTGTCTGTGAAGGATGATGGGTTAATTCTCATAAGGTTTGAAAGTATAACTGGGAGCCCAGTCGTTAGTGGGATTTGCATTAGGAGAGCAACGAAGGCATTAGtTTCACAAGTGACAAGTGATTACATTAAATGTAGCTACTGTACTGCACAGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGGCAAAGTCTACAGCAAAGTACGAGAATAAGATAAAGGAGCTCACAATGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCACTAACTGCAACAAATGAGCAATTGGAGGCAGTCCAGATGGAACTTGACAAAGTGACATTTAAGTCACTCACTACTGATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAGGAATATTTCTAATAGGTATGAGCTTGATAGGAAGAAATGGACAGAAGCAATTAACAGTTTACAGgaaaaaataaagTTGATGAAGAGTGATTATTCAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCTgagttaaataatatggttttTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGatgacaaaaagaaagaaactctTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGTCGATGTCGTCCATTGCATAAGGCTGAAATCTCAGCTGGGTGCAATACAGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAGTTTTGACAAGTGGCTCCACCAAAAAATCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACAGAGCAGAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAATTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGCTTGAGGTTTACAATGAACAAATCAGAGACTTATTGGCTACAGGACAAACATCAAAAAgGTTGGAGATAAAACAAGCTTTTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGATTGATAACATAAATGAAGTGTGGAATGTACTGCAGACCGGAATTAATGCTAGAGCAGTTGGAAGTAATAACCTTAACGAGCATAGCAGTCGATCTCACTGcatgctttgtatAACAGTAAAGGCTAAAAATTTGTTGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGATAAGACTAAAGCGGATGGGGAACGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCCCTTGGAGATGTAATATCCGCTTTAGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTGACGCATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACCTTGATGTTTGTACAAATTAGTCCATCAGACCAGGACGTAGGTGAGACACTGAGTTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGATGAAAGCAATGCTTGAAAAAGCTCGGAGTGAGTGCAGAATTAAAGATGAATCTATGCgaaaacttgaagaaaatttGCAAAGCATGGAGAGTAAGGCCAAAGGCAAGGATCAAATTTACAGAAATCTACaagaaaagattaaagaacTTGAGGGACAGATTGAGTTGAAAAAAGCCATGCAAAATGAGTCAGAGAAACAAATCTCTCAATTATCTGACAAATTGAGAGGGAAAGAAGAAACCTGCAGTACTCTTCAACAAAAGGTGAAAGAGCtagagaaaaagatgaaagaacaACTGCAGTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGACCTAGAGAAAAAGCTGAAAGATCAGATGCAAGCGTCTGAGTCTGAATCTGCCATTTTGAAAGATAAGATCAAGGAGCTTGAGAGAAACCTGAAAGAGCAGGAACAGAGCTCAATGTCCTTGCTTCGTCAACAGATGAAGGAACTGGAGAACAGGTACAGAGAGCGTGAGCAACAATGGCAACAAACTCATTGTTTTGTGGATGCAGTAAAGGCCACACCTGAGGTAGGTAAAAGCTGCATGAGTGAAGAATGTCCTAGCGAGATTGAGGCTGGCATTTTAAGGTGTTCAAACTCAGTAAACCGCCAGATAAGTCAAGGTTCTTCTTTGTTCAAAGGGAATGATTCCACTCATCAGATAAGAAGCAAAAGAGAGTTTAGAAGCAATGATGAAAACAACTTTGTTATGTCATCATCATTACACGATAGAAAAGTCACAAGGAAATCTGATCCCCCTAAAATAGTGCGGGGTGGGAGGCCAACTCCAAGACCAGTCATTGCTAATCAAGCTCCAGTGTCTCACAAGAGAGCTAGCACAAGCAGGGATCAGGTTCAAGGAATCAGAGAGAGGGACAGTAAGAAGAAAATTTGGTCAAGATAG 3153 0.3942 MDPIQSNDGVQKYPQTLISEPKDSLMQDANESLFDSMVCDSTSRLIPTGFTRSDNADEECLMFVNAGGDAFSEAAGGITFLGDTYFDGGNIMRTNEQIVEGGDYPFIYQSARLGSFCYRFDNLPPGDYVVDLHFAEIINTNGPKGMRVFNVYIQDEKQVLSELDIYAVVGANKPLQLVDSRVSVKDDGLILIRFESITGSPVVSGICIRRATKALVSQVTSDYIKCSYCTAQIEIPSSQMKVMQAKSTAKYENKIKELTMQCELKAKECYEAWMSLTATNEQLEAVQMELDKVTFKSLTTDQTVEKQAESLRNISNRYELDRKKWTEAINSLQEKIKLMKSDYSKLSFEAHECVDSIPELNNMVFAVQELVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFCRCRPLHKAEISAGCNTVVDFDAAKDGCLGVLTSGSTKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKISKERSETFSYDISVSVLEVYNEQIRDLLATGQTSKRLEIKQAFEGFHHVPGVVEAKIDNINEVWNVLQTGINARAVGSNNLNEHSSRSHCMLCITVKAKNLLNGECTKSKLWLVDLAGSERLDKTKADGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKMKAMLEKARSECRIKDESMRKLEENLQSMESKAKGKDQIYRNLQEKIKELEGQIELKKAMQNESEKQISQLSDKLRGKEETCSTLQQKVKELEKKMKEQLQSESASFQQKVWDLEKKLKDQMQASESESAILKDKIKELERNLKEQEQSSMSLLRQQMKELENRYREREQQWQQTHCFVDAVKATPEVGKSCMSEECPSEIEAGILRCSNSVNRQISQGSSLFKGNDSTHQIRSKREFRSNDENNFVMSSSLHDRKVTRKSDPPKIVRGGRPTPRPVIANQAPVSHKRASTSRDQVQGIRERDSKKKIWSR 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1895 1050 MobiDBLite consensus disorder prediction 1032 1050 - -
Ssu2g1895 1050 MobiDBLite consensus disorder prediction 988 1050 - -
Ssu2g1895 1050 CDD KISc_C_terminal 399 725 - -
Ssu2g1895 1050 ProSiteProfiles Kinesin motor domain profile. 401 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 ProSitePatterns Kinesin motor domain signature. 623 634 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu2g1895 1050 Gene3D - 56 213 - -
Ssu2g1895 1050 SUPERFAMILY Tropomyosin 734 916 - -
Ssu2g1895 1050 Pfam Malectin domain 62 206 IPR021720 -
Ssu2g1895 1050 Coils Coil 744 910 - -
Ssu2g1895 1050 Coils Coil 367 401 - -
Ssu2g1895 1050 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 1036 - -
Ssu2g1895 1050 Gene3D Kinesin motor domain 346 724 IPR036961 -
Ssu2g1895 1050 Gene3D - 725 890 - -
Ssu2g1895 1050 MobiDBLite consensus disorder prediction 1 21 - -
Ssu2g1895 1050 SMART kinesin_4 399 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 Coils Coil 315 342 - -
Ssu2g1895 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 759 IPR027417 -
Ssu2g1895 1050 Pfam Kinesin motor domain 407 722 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 PRINTS Kinesin heavy chain signature 673 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 PRINTS Kinesin heavy chain signature 593 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 PRINTS Kinesin heavy chain signature 624 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g1895 1050 PANTHER KINESIN-LIKE PROTEIN KIN-14R 28 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1895 Ssu-Chr2 70716298 70722256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1895 373 777 Calmodulin-binding Proteins AT5G65930 40.488 6.15e-84 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1895 K10406 - gmx:100800016 1867.82