Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1868 ATGAGGGACACAGGGAAAGCAACGTGGGCAACGAGCATGAGAACTTTGAAGAAGTGGTTCACATCGTCGCAGGCTCTATTGAGCATATTACTAGTGCAAGTTTTTGCCACTGGGATGGAGCTACTATCAAGGGTCATATTGGTTCAGGGCACTTTCGTCTTTGCACTTGTTGCCTATCGTCATATTATTGCTGCCATTTGTGTTGCCCCCTCTGCAATCTACTTCGAAAGAGGCCAGACAAAGAAGTTCACTTGGAAAGTTTGGTTTTGGCTTTTTATTAATGCACTAACGGGGATGACTATGGCTCAAGGATTGTTTTATTATGGTCTACGAGACACTTCAGCTACTTACTCTTCCAGCTTTCTCAACTTGATTCCTATATGCACTTTCCTTACCTCTATCATATGTAGAATGGAGACATTGGGGTTGCAAACATGGGCAGCTTGGTTTATTGCTCAAGTGATGTTGCTTGAAGTATTTCCATTGAGAGCCAAGGGGCCTACTTATCCCCCAATGTTCAATCCACTTGTTCTTATTTTTGTGGCCTTATCAGAAGCTATCTTACTTGGCGAGCCATTGGGAGTTGGAACGTTGTTGGGGATGGTTTTGATCATTGTGGGATTGTACTCCTTTTTGTGGGGCAAAAAGAGTGCGACACAGTGCTTGCCTCAAACAAATGTAGCAGCTGCAGAAGAATCAATGGGATCGTACTATCTCATTGAACGCGAGGATATGGAGTACCCTTAG 747 0.4391 MRDTGKATWATSMRTLKKWFTSSQALLSILLVQVFATGMELLSRVILVQGTFVFALVAYRHIIAAICVAPSAIYFERGQTKKFTWKVWFWLFINALTGMTMAQGLFYYGLRDTSATYSSSFLNLIPICTFLTSIICRMETLGLQTWAAWFIAQVMLLEVFPLRAKGPTYPPMFNPLVLIFVALSEAILLGEPLGVGTLLGMVLIIVGLYSFLWGKKSATQCLPQTNVAAAEESMGSYYLIEREDMEYP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1868 248 SUPERFAMILY Multidrug resistance efflux transporter EmrE 166 216 - -
Ssu2g1868 248 PANTHER WAT1-RELATED PROTEIN 23 147 IPR030184 GO:0016021|GO:0022857
Ssu2g1868 248 PANTHER WAT1-RELATED PROTEIN 153 232 IPR030184 GO:0016021|GO:0022857
Ssu2g1868 248 PANTHER WAT1-RELATED PROTEIN 23 147 - -
Ssu2g1868 248 PANTHER WAT1-RELATED PROTEIN 153 232 - -
Ssu2g1868 248 Pfam EamA-like transporter family 26 152 IPR000620 GO:0016020|GO:0016021
Ssu2g1868 248 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1868 Ssu-Chr2 70403098 70404213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1868 162 244 Nodulin-like Gene Family AT5G07050 30.769 1.01e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1868 - - gmx:100782551 228.024