Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1862 ATGGATCCGCTCATAGGATCCAACCCCGAACCCGAAAACCCTATCTCCACGTGCACTTCCATGCTCTCCCATCGCCGCTTCTCCGCGTGCCGCGACTTCGCCTGCCGCCTTCCCCCCTCCGACTCCGTCGCCCGAGTCCTCGCCGTCGCCGACGTCCTCTCGGCCGCCGACTTCTACTCCGTCCTCCAGCTCCGCCCCTCCGACGGCGGCAACCGCGACCTCGCGCGGCGGCAGTACGCGAAGCTCGCGCTCCTCCTCGACCCGACGAGCCCCGACAAGGTCCCCTTCTCCGACGAGGCCCTCGCACGCGTGCAAGAGGCCTGGCACGTGCTCTCCCACCCCGAACGCCGCGCCCTCTACGACCGCGAGCTCCAACGAACAACGACGACGACGTTTTGGACCGCGTGTCCCTACTGCTGGAACCTCTTCGAGTACGAGAAGAGGTACGAGGATTGCGCGCTGCTGTGCCAGGCTTGCGGGAAAGCGTTCCAGGGAGTGGCGGTGAAGCCGCCGGTGAAGGTGGGCGATGCGGTGGTGGAGGGGTTGCAGCTCCGGCAGTACTACTCCTGTGAGGCGAGTGTGCCCTTGATGCATTATGAAGTTAAGGCAGAGAACATTTTGGGGGAACAAAATGCTCAATATGTGTACATttctgatgatgatgatgaagggTATGTGAGAAATGAAGGGCGTGAGAAGCGGCGAATGAGGGTAAAGACTGTGGCGAAGAAGGTTGGTGGGAACAGGATGAGGAGGCCTCTTGATAGTGACTCGGATTTGGATGTGGAAGATGGTGAGTTGGAGTTCACGGAAGGAGATGATGATGTCTTTGTTGGTGTAAGGTTTGACAATTGA 855 0.5883 MDPLIGSNPEPENPISTCTSMLSHRRFSACRDFACRLPPSDSVARVLAVADVLSAADFYSVLQLRPSDGGNRDLARRQYAKLALLLDPTSPDKVPFSDEALARVQEAWHVLSHPERRALYDRELQRTTTTTFWTACPYCWNLFEYEKRYEDCALLCQACGKAFQGVAVKPPVKVGDAVVEGLQLRQYYSCEASVPLMHYEVKAENILGEQNAQYVYISDDDDEGYVRNEGREKRRMRVKTVAKKVGGNRMRRPLDSDSDLDVEDGELEFTEGDDDVFVGVRFDN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1862 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 231 - -
Ssu2g1862 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 229 283 - -
Ssu2g1862 284 ProSiteProfiles dnaJ domain profile. 57 124 IPR001623 -
Ssu2g1862 284 SUPERFAMILY Chaperone J-domain 51 124 IPR036869 -
Ssu2g1862 284 Gene3D DnaJ domain 50 134 IPR036869 -
Ssu2g1862 284 CDD DnaJ 57 112 IPR001623 -
Ssu2g1862 284 Pfam DnaJ domain 57 121 IPR001623 -
Ssu2g1862 284 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 231 - -
Ssu2g1862 284 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 229 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1862 Ssu-Chr2 70272895 70273749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1862 10 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 33.628 5.41e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1862 - - gsj:114406356 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1862 2 70272895 70273749 Ssu5g1141 5 36845849 36846631 PCT