Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1791 ATGAATCCACCACAATATATGAGACAACCCAGTGATATTCATGAGCGCAAGAAGAAGACCTACACCAAGCCCAAGAAGATCAAGCACAAGCACAAGAAGGTCAAGCTCGCCATCCTGCAGTTCTACAAGGTCGACGACTCCGGCAAGGTCCAGAGGCTCAGGAAGGAGTGCCCCAACGCCGAGTGCGGCGCCGGGACCTTCATGGCCAACCACTTCGACCGCCACTACTGCGGCAAGTGCGGCCTCACCTATGTCTACCAGAAGGCCGGTGCTTAA 276 0.5543 MNPPQYMRQPSDIHERKKKTYTKPKKIKHKHKKVKLAILQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1791 91 PANTHER UBIQUITIN-40S RIBOSOMAL PROTEIN S27A-1 14 82 - -
Ssu2g1791 91 Gene3D - 15 90 IPR038582 -
Ssu2g1791 91 SUPERFAMILY Zn-binding ribosomal proteins 36 89 IPR011332 GO:0006412
Ssu2g1791 91 MobiDBLite consensus disorder prediction 1 27 - -
Ssu2g1791 91 SMART Ribosomal_S27_2 38 83 IPR002906 GO:0003735|GO:0005840|GO:0006412
Ssu2g1791 91 Pfam Ribosomal protein S27a 38 83 IPR002906 GO:0003735|GO:0005840|GO:0006412
Ssu2g1791 91 PANTHER UBIQUITIN 14 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1791 36 91 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 87.500 2.19e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1791 K02977 - qsu:111999144 138.272