Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1779 ATGGCTAATGAATCCTCGTCAAATGGGTCATCTGCATCGGATTCCGACGAGGCTTCGGCACTATCATCTTCATCGTCGTCCGATGACGCAGAGTCTCCCAAAAGTACACCGTCAAAGTCTCTGCCGCCGTCACCCCCTTCACCGACACCACCGTCGCCGCCATCACCATCACCGCCGGCTAAATCTTCTCCTCCACCGACACAATCTCCTCCGGCGCCGGCAAATTCTCCACCGCCAACTGAACCTAATTCTCCACCACCAACTCCATCTCATCCTCCACCGCCAACTCCGCCTCAATCTCCGCCACCTTCCCCTCCTCCGTCAACTCCGCCGCCGGCACAATCTCCGCCGTCTCCGTCAGATTCTTCGCCACCTCCATCAACTCCCTCGCCGTCAAAAGGGTCATCTCCTCCACCCTCTCCGTCGGAGCCACCGCCGTCGCCGCTGCCATCACCGCCACCCCCTCAAAGGTCGCCTCCGTCAGAATCTTATGCCCCTCCTCCGCCGTGGCTTTCGCCTCCAATTGGAATTCCAACTCCACCTTCACCCGCTTCCCATGATactccgccgccgccgccgccgcggCTGGCTCAGCGCCAAAAAACCCTTCACCACCGCAATCACCGACGGTTTCCCAACCAAAACCAAGCGGTGCTCCCCCGAAGAGCAACCATCCGTCCACGTCACCTAGCTCCGATAATAATGCAGGAAAAATTGAGGAAGAAAAAACGAGCGAATATCTATGCCGTGCCACCCCCTAGGAACTCTCATACGAAAGGAGGTGCAGATGTGCATTACTATGTAGAGGATCCTGGTTTTAGGAATGGTCAAGTTGCCATGCATTTAAAAACTCCTTTAGATCCGGCTCAACAGATGAATACTGGTCCGGTGGTTTTTACCTATGACAAGGTTGCGGAGATAACTAACGGGTTTTCTAGAGAAAACATAATAGGGGAGGGAGGATTTGGGTATGTTTACAAGTCTTCCATGCCTGATGGTAGAGTGGGGGCGGTTAAGATGTTGAAGGCTGGTAGTGGACAGGGAGAAAGGGAGTTCAGGGCTGAGGTGGACATTATCAGTCGTGTCCATCATCGACATTTGGTATCGTTGATTGGTTATTGCTTATCTGAACAGCAAAGAGTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCATGGAAATGAATGGCCAATTTTGGATTGGCCCAAGAGGATGAAGATAGCAATTGGCGCTGCTAGGGGCCTGGCATATCTCCATGAAGGCTgcAACCCAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGATGAAGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTAACGGACGATGCTAATACTCACGTATCAACTAGGGTGATGGGGACCTTCGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACAGATAGATCAGatgttttctcttttggagTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCAGTTGATACAATGCAGCCCATAGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTATCCTTCGTGCAGTTGAGACAGGTGACTTTGGTGAACTAGTAGACCCAAGGCTTGAACGGCAATACGTTGACAGTGAAATGTTCAGAATGATTGAGGCAGCTGTAGCATGTGTTCGCCATTCTGCTCCAAAACGACCTTGTATGGTTCAGGTGTCAAGAGCCTTAGATAGTGGTGATCAACTATGTGATCTATCGAATGGCGTGAAATATGGTCAGAGCACTATTTATGATTCTGGCCAGTATGATGAAGACATTACGAGATTCAGAAGGGTGGTTAATGGCAGCTTTGATGATTCTGAGTTTGATATGTACAGTATGGAATACCGTTCAAATGTTTCAAGAGTTTAG 1935 0.4832 MANESSSNGSSASDSDEASALSSSSSSDDAESPKSTPSKSLPPSPPSPTPPSPPSPSPPAKSSPPPTQSPPAPANSPPPTEPNSPPPTPSHPPPPTPPQSPPPSPPPSTPPPAQSPPSPSDSSPPPSTPSPSKGSSPPPSPSEPPPSPLPSPPPPQRSPPSESYAPPPPWLSPPIGIPTPPSPASHDTPPPPPPRLAQRQKTLHHRNHRRFPNQNQAVLPRRATIRPRHLAPIIMQEKLRKKKRANIYAVPPPRNSHTKGGADVHYYVEDPGFRNGQVAMHLKTPLDPAQQMNTGPVVFTYDKVAEITNGFSRENIIGEGGFGYVYKSSMPDGRVGAVKMLKAGSGQGEREFRAEVDIISRVHHRHLVSLIGYCLSEQQRVLIYEFVPNGNLNQHLHGNEWPILDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSANILLDEAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDTMQPIGEESLVEWARPLILRAVETGDFGELVDPRLERQYVDSEMFRMIEAAVACVRHSAPKRPCMVQVSRALDSGDQLCDLSNGVKYGQSTIYDSGQYDEDITRFRRVVNGSFDDSEFDMYSMEYRSNVSRV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1779 644 MobiDBLite consensus disorder prediction 1 37 - -
Ssu2g1779 644 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 87 643 - -
Ssu2g1779 644 ProSiteProfiles Protein kinase domain profile. 311 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1779 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Ssu2g1779 644 Pfam Protein tyrosine and serine/threonine kinase 314 516 IPR001245 GO:0004672|GO:0006468
Ssu2g1779 644 MobiDBLite consensus disorder prediction 38 197 - -
Ssu2g1779 644 MobiDBLite consensus disorder prediction 1 209 - -
Ssu2g1779 644 Gene3D Transferase(Phosphotransferase) domain 1 387 597 - -
Ssu2g1779 644 CDD STKc_IRAK 317 585 - -
Ssu2g1779 644 PANTHER RECEPTOR-LIKE KINASE 87 643 - -
Ssu2g1779 644 SUPERFAMILY Protein kinase-like (PK-like) 291 583 IPR011009 -
Ssu2g1779 644 SMART serkin_6 311 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g1779 644 Gene3D Phosphorylase Kinase; domain 1 276 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1779 Ssu-Chr2 68519946 68524265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1779 292 643 Trihelix Transcription Factor Family AT1G70460 68.182 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ssu2g1779 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1779 - - gmx:100807815 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1779 2 68519946 68524265 Ssu2g1779 2 68519946 68524265 ECH