Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1764 ATGGTCATCGGGGATGGCATCCTCACACCGGCTATTTCTGTTTTCTCGGCTGTGTCTGGATTGGAGCTTTCGATGTCCAAGGAGAATCACGCATATGTCGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACATTATGGCACACACAGAGTTGGCTTCTTGTTTGCTCCCATAATTATCACATGGCTTTTTTGCATTAGCGCCattggtatatataatatattttactggAATCCTCATGTATACAAAGCACTCTCTCCATATTATGCTTACCTACTTTTAAGGAAAACTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATAACAGGATCAGAAGCCATGTTTGCTGATCTTGGACACTTTACACAATTATCAATCAAGATTGCTTTTACTTCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATAACATTGAGAAAGATTATCACTTTGGGTTTTACGTATCTGTACCAGACAAATTGAGATGGCCTGTTCTGGTTATAGCCATACTTGCTGCAGTAGTGGGAAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAATGCTCCGCATTAAGTTGTTTCCCAAGAGTTAAAGTGGTTCACACATCATCGAAAATTCATGGGCAAATATATATCCCCGAGATCAATTGGCTATTGATGCTTTTGTGTTTGGCAGCAACTATTTGTTTCAGAGACACAAAGCGCCTGGGTAATGCCTCAGGTTTGGCAGTTATCACAGTGATGCTGGTGACCACCTGTTTGATGTCACTGGTTATTGTACTATGCTGGCACCAGAATGTCCTCCTTGCACTTGGGTTTGTTGTCATATTTGGCACCATTGAGGCTCTCTTCTTCTCTGCCTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCCATAGCATTGGCACTTGTATTTCTGACTTTCATGTATGTTTGGCACTATGGCACACTCAAAAAGTATGAATTTGATGTTCAGAACAAGATTTCCATCAACTGGCTACTCGGCCTAGGTCCCAGCATAGGTTTTGTACGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTGTCTGGAATTCCGGTACTCTTCTCCCACTTTTTAACCAACCTCCCAGCCTTCCATCAAGTCCTAGTTTTTCTCTGCATCAAACATGTTCCGGTTCCACATGTTAGACCTGAGGAGCGGTTTCTAGTTGGTCGCGTTGGTCCGAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGATGATATAGAGTTTGAGAATGATCTTTTATACAGCATAGCAGAGTTCATACGCACAGAAAGAACTGCATTGAACTCTTCAAATGATGAGCCTGGAAAGGATGACACAATGGCAGTTGTTGGGACATGTTCTACACATTCCATTTTGATGAGTGAGGATAATGTAGATAATGTTGAAAATGTAGACTTGCCAGCGACATCAGAACTAAAGGAGATAAAGTCACCCAAGGTGATCCAGCAGAGGAAAACGGTAAGGTTTTTGGTACCAGAGAGTCCAAAGATTGATACAGATGTAATGGAAGAGTTGGAGGAGGTGATGGAAGCCAGGGAGGCTGGGGTAGCTTACATTATAGGACAGACACACATGAGAGCCAAACCAGGGTCGAGCATGCTGAAGAAAATAGCCATTAATTTAGTGTATGAATTTCTTAGAAGAAATAGCAGGGCACCCTCCTTTGTCACTGGTGTGCCTCATGCATCATCTCTGGAAGTTGGGATGATGTACCAAGTCTAA 1848 0.4269 MVIGDGILTPAISVFSAVSGLELSMSKENHAYVEVPAACIILIGLFALQHYGTHRVGFLFAPIIITWLFCISAIGIYNIFYWNPHVYKALSPYYAYLLLRKTQKGGWMALGGILLCITGSEAMFADLGHFTQLSIKIAFTSVVYPSLILAYMGQAAYLSKHHNIEKDYHFGFYVSVPDKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEINWLLMLLCLAATICFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVVIFGTIEALFFSASLIKFLQGAWVPIALALVFLTFMYVWHYGTLKKYEFDVQNKISINWLLGLGPSIGFVRVRGVGLIHTELVSGIPVLFSHFLTNLPAFHQVLVFLCIKHVPVPHVRPEERFLVGRVGPKEFRLYRCIVRYGYRDVHKDDIEFENDLLYSIAEFIRTERTALNSSNDEPGKDDTMAVVGTCSTHSILMSEDNVDNVENVDLPATSELKEIKSPKVIQQRKTVRFLVPESPKIDTDVMEELEEVMEAREAGVAYIIGQTHMRAKPGSSMLKKIAINLVYEFLRRNSRAPSFVTGVPHASSLEVGMMYQV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1764 615 TIGRFAM kup: potassium uptake protein 1 615 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu2g1764 615 Pfam K+ potassium transporter 1 442 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu2g1764 615 PANTHER POTASSIUM TRANSPORTER 6 1 615 - -
Ssu2g1764 615 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 615 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1764 Ssu-Chr2 68196911 68201277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1764 1 615 Inorganic Solute Cotransporters AT1G70300 73.786 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1764 K03549 - gmx:100793141 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1764 2 68196911 68201277 Ssu2g1764 2 68196911 68201277 ECH
Ssu2g1764 2 68196911 68201277 Ssu5g1057 5 33240917 33246795 PCT
Ssu5g1058 5 33286587 33294142 Ssu2g1764 2 68196911 68201277 PCT