Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1763 atggcatcaaaATCATATGCTAATCTACTGGACTTAGCTGGAGGTTTACTGGATATTCCTCACACCCCAAGAACTATTCCAAGGATTATGACAGTTCCTGGAGTTATTTCTGACATGGATGTTTATGGTAGATATGATGGGGATTCAGATGTTAGCTCTTCTGGTTATCAGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGGTAAATGGTGTTTCAGTTTGGATGAGGATTCaattttgttacaattaaaagATGGTTTTTCTTCTGACACTGAGGTGATCTATGTGGGATCCCTCAAGGTTGAAATAGATGCCCATGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGGCTTTAATTGCATACCTACCTTTCTACCCCATGATCTCCAGAAAAAGTTTTATCTTGGCTTTTGCAAACAGCAGCTTTGGCCTCTCTTTCATTACATGCTACCTATGTTCCCTGATCATGGTGATCGGTTTGACCGCTTGCTTTGGCGGGCTTATGTTTCtgcaaacaaaatatttgcagACAAGGTTATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACATTTCTGAGGAAGCAGTATAATCGAGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCATCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGAAATTCTGAGAGGATTGTTGAATTCTGATTTAATTGGTTTCCATACATTTGATTATGCTCGCCACTTCCTCTCTTGTTGCAAAAGAATGCTAGGTCTTGACTATGAATCTAAACGAGGACATATAGGAATTGATTATTTTGGCCGTactatatttatcaaaattttgccTGTAGGTATTCATATGGGTAGGCTTGAATCTGTATTAAATCTTCAATCTACATCAGCTAAATTGAAAGAGATTCAGGAAGAGTTAAAGGGTATGAAGGTGATTCTTGGTGTGGATGACATGGATATCTTTAAGGGCATCAGTCTGAAGCTTCTAGCTGTTGAACAGCTGCTGCAGCAGAATTCAGATTTGCAGGGCAAAGTTGTCCTGGTACAGATTGTGAATCCTGCTAGGAGTTCTGGCAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTGATTGCCCAGAGGATTAATGATACTTATGGCTCAAACCATTATCGGCCATGTTATTCTCATTGA 1245 0.3767 MASKSYANLLDLAGGLLDIPHTPRTIPRIMTVPGVISDMDVYGRYDGDSDVSSSGYQERKIIVANMLPLQAKRDIETGKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDAHEQEEVAQKLLEGFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMFPDHGDRFDRLLWRAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKQYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCKRMLGLDYESKRGHIGIDYFGRTIFIKILPVGIHMGRLESVLNLQSTSAKLKEIQEELKGMKVILGVDDMDIFKGISLKLLAVEQLLQQNSDLQGKVVLVQIVNPARSSGKDVQEAKKETYLIAQRINDTYGSNHYRPCYSH 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1763 414 Gene3D Glycogen Phosphorylase B; 52 311 - -
Ssu2g1763 414 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 410 IPR001830 GO:0003824|GO:0005992
Ssu2g1763 414 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 8-RELATED 1 410 - -
Ssu2g1763 414 Pfam Glycosyltransferase family 20 59 411 IPR001830 GO:0003824|GO:0005992
Ssu2g1763 414 Gene3D Glycogen Phosphorylase B; 312 414 - -
Ssu2g1763 414 CDD GT20_TPS 59 410 IPR001830 GO:0003824|GO:0005992
Ssu2g1763 414 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 411 - -
Ssu2g1763 414 Coils Coil 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1763 Ssu-Chr2 68147730 68148974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1763 1 410 Trehalose Biosynthesis Gene Families AT1G23870 75.728 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1763 K16055 - gmx:100818536 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1763 2 68147730 68148974 Ssu2g1763 2 68147730 68148974 ECH
Ssu2g1763 2 68147730 68148974 Ssu5g1056 5 33197146 33202692 PCT