Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1753 ATGGAGGGTGTAGGAGTAAGTGTAACAGCAGCAATGGTTGCAACTCAGTTCTTGGAAGTGGGGTTGAACACACTAATCAAATCAGCAAACACCAATGGAATGAgcaattttgttttcattgtgtactCAAACCTCTTGGCTCTCTTCTTCCTTCTACCATCTACCTTGCTCTACCACAGGAAGAGAGCTCCTCCCCCAATTCCAACCTCAATTCTCTGTAGAATGTTTCTTCTTAGCTGCCTTAGTACTGCAGTGCAGACGTTGATGTACACTGGGATCGGATATAGCTCTCCCACACTATCCTCTGCTATGGTGGATCTTGTCCCTGCTTTTACATTCATATTTGCCATTATTTCCAGGATGGAATATCTGAATCTGAAACTGCATAGCTGCCAGGCGAAAATTATTGGCACAGTGATCTCGATTGCAGGGGCATTGATCGTCACTTTATATAAAGGAATGCCATTGACCGGCGGTTCCTTGAGAAATATAGTATTGGGTGGAACTGGAACTTACCGCTCAGTGCAATCAGATTGGTTACTAGGTGGTTCTATTCTTGCAATCGCCAGCTTGTGCCTTTCAGTTTTGTTTATTGTCCAGACTTGGATTCTCAAGGACTATCCTGAAGAGTTAGTGGTAACAAGCATTTGTTGTATCGTGGTGGTAATCCTATCTGCCATAGTAACGCTCTTTGCAGAGGGAAATTCAAGAGCTTGGATTCTCAGATCTGATAAGGAGTTGATAGCTGTATTTTATTCGGCAATATTTGTGGTATCAATGCGGAGTGTTGTAAGCGCATGGGCATGTCGGAAGAAGGGACCAGTTTATGTAGCTATGTTTAACCCTTTGGGAATGGTCATTGCACTTGGCATGGGGGTAATATTTCTGGGAGACAGTCTTTATCTTGGAAGTGTGATTGGAGCTGCTACAATAGGTATTGGATTTTATGCTGTGATGTGGGCGCTGGCTCAAGAGAAAAATATGGTAAATGAGAAGAATGAGAACCATGATTTTGTCACATCTTCTTCAGCCCCTCTGTTGTCTACCAAAAACATGGATATAGCTTAA 1068 0.4213 MEGVGVSVTAAMVATQFLEVGLNTLIKSANTNGMSNFVFIVYSNLLALFFLLPSTLLYHRKRAPPPIPTSILCRMFLLSCLSTAVQTLMYTGIGYSSPTLSSAMVDLVPAFTFIFAIISRMEYLNLKLHSCQAKIIGTVISIAGALIVTLYKGMPLTGGSLRNIVLGGTGTYRSVQSDWLLGGSILAIASLCLSVLFIVQTWILKDYPEELVVTSICCIVVVILSAIVTLFAEGNSRAWILRSDKELIAVFYSAIFVVSMRSVVSAWACRKKGPVYVAMFNPLGMVIALGMGVIFLGDSLYLGSVIGAATIGIGFYAVMWALAQEKNMVNEKNENHDFVTSSSAPLLSTKNMDIA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1753 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 320 - -
Ssu2g1753 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Ssu2g1753 355 Pfam EamA-like transporter family 185 319 IPR000620 GO:0016020|GO:0016021
Ssu2g1753 355 Pfam EamA-like transporter family 20 149 IPR000620 GO:0016020|GO:0016021
Ssu2g1753 355 PANTHER WAT1-RELATED PROTEIN 16 324 - -
Ssu2g1753 355 PANTHER WAT1-RELATED PROTEIN 16 324 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1753 Ssu-Chr2 67806702 67812302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1753 11 353 Nodulin-like Gene Family AT3G28050 43.785 2.45e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1753 - - gmx:100793168 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1753 2 67806702 67812302 Ssu2g1753 2 67806702 67812302 ECH