Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1752 ATGCAGGGTCTAGGAGTCACAACAATCATGGTAGCCGTCCAGTGCTTGGAAGTCGGTTTGAACACCATAGTCAAAGCAGCCACCACCAAAGGGATgagtaaatttgttttcattgtgtactCAAACGTGGTTGCCTTCTGTTTCCTTCTAGTATCTACCTTCATCTATCGcagAAAGAGAGCTTCTTCCTCAATCACAAGCCCGATTGTGCGCCGAATATTTCTTCTTAGCTTGATCAGTTGTTCTGAACAGACGTTGATGTATACTGGTATTGGATATAGCTCTCCCACTCTGGCTTCCGCTATGGTGGATCTCACTCCAGCTTTTACCTTCATTGTTGCCGTCCTTTCCCGGATGGAAAAACTGGACCTGAAACTACAGAGCAGTCAGGCAAAAAGTATTGGCACTGTGGTCTCTATCTTAGGGGCATTAACGGTGACTCTATACAAGGGCATGCCATTGACTAGTGAAAGTGATTCACTGCAAAACATAGTCATAGACGAGAATTTCCTCTCACAGCAATCAGATTGGCTACTTGGAGGCTTCCTCCTCTCAGCTGCTAGCTTCTGCCTTTCCCTTGTGTTCATTATCAAGaCATGGATTATCAAGGACTACCCTGAAGAGTTAACAGTGACAACAATTTCTTGTGGTTTTGTGGTCATTCTATCCTCCATTGTAGCAATTGTTGCAGAGACAAGCCTAGAAGCATGGGTGGTCAAACCTGATATGGAGTTGATAGCCATATTGTATTCGGCATTTTTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTCGCAAGAGAGGGCCTGTGTATGTTGCTATGTTTACTCCTTTGGGGATGGTCATTGCACTTGTGATGGGGATCATATTTTTAGGGACACCCTTTATCTTGGAAGTATGTCAGCTGCACATGATTCATCACTTAGTGTCACCTTTAAAGAGCAAGGTTGGTGGATGGATTACCCATTCCGATGCATTAGCTGTGACAAGAGACTGGTAA 1008 0.4325 MQGLGVTTIMVAVQCLEVGLNTIVKAATTKGMSKFVFIVYSNVVAFCFLLVSTFIYRRKRASSSITSPIVRRIFLLSLISCSEQTLMYTGIGYSSPTLASAMVDLTPAFTFIVAVLSRMEKLDLKLQSSQAKSIGTVVSILGALTVTLYKGMPLTSESDSLQNIVIDENFLSQQSDWLLGGFLLSAASFCLSLVFIIKTWIIKDYPEELTVTTISCGFVVILSSIVAIVAETSLEAWVVKPDMELIAILYSAFFVVSLRSIVHIWACRKRGPVYVAMFTPLGMVIALVMGIIFLGTPFILEVCQLHMIHHLVSPLKSKVGGWITHSDALAVTRDW 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1752 335 PANTHER WAT1-RELATED PROTEIN 13 299 - -
Ssu2g1752 335 PANTHER WAT1-RELATED PROTEIN 13 299 IPR030184 GO:0016021|GO:0022857
Ssu2g1752 335 Pfam Uncharacterised protein family (UPF0220) 108 231 IPR007919 -
Ssu2g1752 335 Pfam EamA-like transporter family 7 146 IPR000620 GO:0016020|GO:0016021
Ssu2g1752 335 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1752 Ssu-Chr2 67797789 67803842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1752 10 295 Nodulin-like Gene Family AT5G40240 43.253 6.34e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1752 - - gmx:100793168 360.533