Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1751 ATGAAGGGCGCACAGGTAACCATAGCAATGGTTGTGGCACAGTTCTTGACTGTGGGTTTGAACACTCTGATCAAAGCATCCATGTCTAAAGGAATGAGCAATTTCGTTTTTGTTGCGTATTCAAACCTTCTCGCACTCTGTTTGCTGCTACTAGCAACCACAATCCATCACAGAAACAGAGCTCCTACACCAATCAACAAATCGGTTATCTTCAGAATTTTTATTCTTAGCTTGCTCAGCATTGCCATACAGACGTTTATTTATACTGGACTTGGGTATACCTCTCCCACTCTCACCTCAGCCATGGAGGACCTTATTCCAGCTTATACTTTCATAATCGCCATTATTTCCAGGATGGAAAAGTTGGATCTAAAACTACGAAGCTGCCAGGCAAAATCCATTGGGACTGTGATCTCAATTGCAGGTGCATTAACCGTGACCTTATACAAAGGGTTGCCTGTGACAAGTGGTGTGATGCCAAACGATGTGCTTCTCTCATCACAACAATCAAAATGGCTATTAGGAGGCTTTCTTCTTGCAGTTGGTAGCTTTTGTTGTTCAATCTCGCTCGTCATCCAAACCTGGACTATCAAAGACTACCCTGAGGAGCTAATGCTAACAACCATTTGTTGCGGTTTCGTTGTTATCCTATCATTCGTAGTAGCTTTCGTTGCAGAGGAAAATCCAAAGGCATGGATACTTAAACCTGATATGGAGTTGGTGTGCATATTCTATTCAGCATTTGTGGTTATATCTACTCGAAGTGTGGTGCATGCATGGGCGTGTCGAAAGAAGGGGCCTGTATATGTCGCTATGTTCAATCCTTTGGGAATTGTCATTGCACTTGCCCTGGGGGTTGTATTTTTGGGAGACACTCTATATCTTGGAAGTATGATTGGAGCTGCTATAATAGCAATTGGGTTTTATGCTGTAATATGGGGTCAGGCTCAAGAGGAAGTGATGGCTTGTGAAAAATATGGACCCTATAGCATTATCTCACCGTCTTCTTCTGAAGCCCCTCTTTTAGTGAACAAAAGTAAGGACACGGGTTCTGGTAACGTATAG 1065 0.4291 MKGAQVTIAMVVAQFLTVGLNTLIKASMSKGMSNFVFVAYSNLLALCLLLLATTIHHRNRAPTPINKSVIFRIFILSLLSIAIQTFIYTGLGYTSPTLTSAMEDLIPAYTFIIAIISRMEKLDLKLRSCQAKSIGTVISIAGALTVTLYKGLPVTSGVMPNDVLLSSQQSKWLLGGFLLAVGSFCCSISLVIQTWTIKDYPEELMLTTICCGFVVILSFVVAFVAEENPKAWILKPDMELVCIFYSAFVVISTRSVVHAWACRKKGPVYVAMFNPLGIVIALALGVVFLGDTLYLGSMIGAAIIAIGFYAVIWGQAQEEVMACEKYGPYSIISPSSSEAPLLVNKSKDTGSGNV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1751 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 316 - -
Ssu2g1751 354 PANTHER WAT1-RELATED PROTEIN 14 318 IPR030184 GO:0016021|GO:0022857
Ssu2g1751 354 PANTHER WAT1-RELATED PROTEIN 14 318 - -
Ssu2g1751 354 Pfam EamA-like transporter family 174 312 IPR000620 GO:0016020|GO:0016021
Ssu2g1751 354 Pfam EamA-like transporter family 9 146 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1751 Ssu-Chr2 67768423 67772762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1751 9 351 Nodulin-like Gene Family AT5G40240 40.171 3.17e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1751 - - gmx:100814600 526.168