Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1748 ATGATGGGATGGGTGAATGGTACGGGCAATTTACTGCCATTTGTTGGGATGGTGATGGCTATGCTGACTCAAAGTGGCAGCATGGTGGTAATCAAAGTTGCCATGGCTGATGGGATGAACAAGTATGTCATGGTTGTGTACTCAATGGCACTGTCCAGCTTCTTGCTTCTTCCCTTTGTCTTGTTTCTACACAGGTCAGAGCGTCCTCCTCTCACATTCCCTACACTTTGCAGCTTCTTTTTGCTTGCACTCTTTGGGAGTTCAGCACAGATAATGGCTTATGTTGGCATAGAACTCAGCTCGCCTACTCTTGCGTCAGCCATGCTCAACCTCATTCCAGCTTTCACTTTTGTACTCGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGACAATTTAGCAGCCAAGCTAAAGTCTTAGGAACAATAGTATCAATTGCTGGAGCATTCGTTGTGATACTATACAAGGGCCCACCGATCTTTAAGACACATTTGTCATACCCTTCCAACCAAGTTCTATTTTCGCCTCAACTAAACTGGATCCTAGGAGGGATATTCTGTGTTGGCGATTCTTTCCTTTGTTCCATGTGGTACATATATCAGGCTTCGGTTGCAAAGAAATACCCTGCTGTAACAGTCATAGTCTTTTTCCAAATCTTATTTTCAACCATTCAGTCTGCGGTATTTGCCTTAATTGCTGTTAGAGATCCAAGGGAATGGAAGCTGAAGTTTGATATGGGATTGATTGCTATTTTATATCAGGCAATAGCTGCAACATTGATACGTTACATCCTATGCACATGGTGCGTCCATAGAGCCGGTCCTCTGTTTTGTGCTATGTTCAAGCCTGTGGGAATCATCTTCACCGTTTTCATGGGTGCAATCTTTCTCGGGGATGATTTCAGCCTTGGAagTTTGATTGGTGCGGTTATAATCGTGGTAGGATTTTATGCTGTACTGTGGGGAAAATCCAGAGAGGAGAACAAGATTGAGAGAGGGGTTAAGAACTTGGAGTCATCGTGCCATAATGTTCCTTTATTACAAAATACGGAGTTGAATATTTGA 1065 0.431 MMGWVNGTGNLLPFVGMVMAMLTQSGSMVVIKVAMADGMNKYVMVVYSMALSSFLLLPFVLFLHRSERPPLTFPTLCSFFLLALFGSSAQIMAYVGIELSSPTLASAMLNLIPAFTFVLALIFRMEEVHWRQFSSQAKVLGTIVSIAGAFVVILYKGPPIFKTHLSYPSNQVLFSPQLNWILGGIFCVGDSFLCSMWYIYQASVAKKYPAVTVIVFFQILFSTIQSAVFALIAVRDPREWKLKFDMGLIAILYQAIAATLIRYILCTWCVHRAGPLFCAMFKPVGIIFTVFMGAIFLGDDFSLGSLIGAVIIVVGFYAVLWGKSREENKIERGVKNLESSCHNVPLLQNTELNI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1748 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Ssu2g1748 354 PANTHER WAT1-RELATED PROTEIN 12 347 IPR030184 GO:0016021|GO:0022857
Ssu2g1748 354 PANTHER WAT1-RELATED PROTEIN 12 347 - -
Ssu2g1748 354 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020|GO:0016021
Ssu2g1748 354 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Ssu2g1748 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1748 Ssu-Chr2 67704430 67707866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1748 2 328 Nodulin-like Gene Family AT5G40240 43.114 3.67e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1748 - - gmx:100792109 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1748 2 67704430 67707866 Ssu2g1748 2 67704430 67707866 ECH