Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g1745 | ATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGTAGAAGCAAATCTCAAGAACATACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACACCACGACCCACAAAAAGGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTTGGAAAAGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAAAAAATGGAGTTGCCGGCAATTAAAGCAGCAGAGGGGGAACGGGAGTTCCGTGTCGAAGTTGACATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCCTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTGGGAGCCGCTAAAGGGCTTGCTTATCTCCATTCAAGTTCTGATGTTGGAATTCCAATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGATATCTGATTTTGGGCTAGCGAAGTTAATGCCAGAAGGACAGGAGACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCCGAGTATACATCGACTGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGCCGTCGAGCTGTAGATTTAAACCAAGGTCCCAACGATCAAAATCTTGTACTACAGGTGAGGCACATACTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGATAGTAATGAGAGACCTTCAATGGCAGAATGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG | 1086 | 0.4291 | MPFGLVSAWNKRRRSKSQEHTDPWVYKPAQLWQLEDQTPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTDSNERPSMAECVKELLMIIYTNSKGLGMVMHSLRMI | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g1745 | 361 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 141 | - | - | |
Ssu2g1745 | 361 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 351 | - | - | |
Ssu2g1745 | 361 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
Ssu2g1745 | 361 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 1 | 361 | - | - | |
Ssu2g1745 | 361 | PANTHER | OS01G0750732 PROTEIN | 1 | 361 | - | - | |
Ssu2g1745 | 361 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu2g1745 | 361 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Ssu2g1745 | 361 | SUPERFAMILY | Protein kinase-like (PK-like) | 49 | 347 | IPR011009 | - | |
Ssu2g1745 | 361 | CDD | STKc_IRAK | 69 | 340 | - | - | |
Ssu2g1745 | 361 | ProSiteProfiles | Protein kinase domain profile. | 63 | 342 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu2g1745 | 361 | PIRSF | ILK | 32 | 351 | - | - | |
Ssu2g1745 | 361 | Pfam | Protein kinase domain | 64 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g1745 | Ssu-Chr2 | 67654614 | 67658821 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g1745 | 46 | 344 | Receptor kinase-like Gene Family | AT3G58690 | 47.368 | 5.66e-92 | 279 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIb | Ssu2g1745 | Pkinase | 6.3e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g1745 | - | - | gmx:100796654 | 712.605 |