Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1732 ATGCAGGTGCAGGCTTATTACGCTTTTCAACCGCTCACGGCTTATCTTTCCGTTAATTACATGGATCGGTTCTTGAATTCTCGGCCGTTGCCGCAAACGAATGGGTGGCCACTGCAACTTCTTTCTGTTGCGTGTTTGTCTCTAGCGGCAAAGATGGAGGAACCTCTAGTTCCTTCTCTGTTGGATCTTCAGGTAGAAGGTGCCAAATACGTATTTGAGCCCAGAACAATTAGAAGGATGGAGCTATTTGTCCTGGGCGTCTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTCGGTTTCTTTGCGTGCAAGTTAGATTCAACTGGAACATTTACTGGGTTCCTCATTTCACGTGCTACACAAATTATCTTATCTAATATACAAGaggCCAGCTTTCTTGCCTATTGGCCATCATGCATTGCTGCCGCGGGCATTCTACATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGGCCGGAGCATGCCGAGTCGTGGTGCGAGGGGCTGAGAAAGGAGAAAATTATAGGGTGCTACCAATTAATCAAGAACTTGTGA 567 0.4621 MQVQAYYAFQPLTAYLSVNYMDRFLNSRPLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPRTIRRMELFVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAGILHAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLIKNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1732 188 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 2 188 - -
Ssu2g1732 188 Gene3D - 94 156 - -
Ssu2g1732 188 SUPERFAMILY Cyclin-like 1 92 IPR036915 -
Ssu2g1732 188 PIRSF Cyclin_A_B_D_E 1 179 IPR039361 -
Ssu2g1732 188 SMART cyclin_7 1 86 IPR013763 -
Ssu2g1732 188 Pfam Cyclin, N-terminal domain 1 92 IPR006671 -
Ssu2g1732 188 Pfam Cyclin, C-terminal domain 95 187 IPR004367 -
Ssu2g1732 188 Gene3D - 1 93 - -
Ssu2g1732 188 PANTHER CYCLINS 2 188 IPR039361 -
Ssu2g1732 188 CDD CYCLIN 1 85 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1732 Ssu-Chr2 67353323 67355131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1732 1 188 Core Cell Cycle Gene Families AT1G70210 70.000 2.84e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1732 K18810 - gmx:100775224 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1732 2 67353323 67355131 Ssu5g1027 5 32511651 32514892 PCT