Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g1713 | atggtgGTGGTTGGTGCTCTGAGGGGGCACACGAAAGCTATATTGTgtttggtggtggtggcggaTTTGGTGTGCAGTGGATCGGCGGATAACAGTGTTAGGATATGGAGGAGAGGGGTTGAGAAGGGTTATTCGTGTTTGGCTGTGTTGGAAGGTCATCGACGACCCGTGAAGTGTTTGGCTGTGGCGGTTGACTCCAATAGCGGTGGTCCTGAGGATGATAATAGGTCTTATCTGGTTTACAGTGCAGGGCTGGATTGTGACATTAAAGTATGGCAAATACGCGTTCCTCTGTTGTGA | 300 | 0.4533 | MVVVGALRGHTKAILCLVVVADLVCSGSADNSVRIWRRGVEKGYSCLAVLEGHRRPVKCLAVAVDSNSGGPEDDNRSYLVYSAGLDCDIKVWQIRVPLL | 99 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g1713 | 99 | Gene3D | - | 1 | 99 | IPR015943 | GO:0005515 | |
Ssu2g1713 | 99 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 7 | 36 | IPR001680 | GO:0005515 | |
Ssu2g1713 | 99 | SMART | WD40_4 | 43 | 93 | IPR001680 | GO:0005515 | |
Ssu2g1713 | 99 | SMART | WD40_4 | 1 | 37 | IPR001680 | GO:0005515 | |
Ssu2g1713 | 99 | Pfam | WD domain, G-beta repeat | 5 | 36 | IPR001680 | GO:0005515 | |
Ssu2g1713 | 99 | Pfam | WD domain, G-beta repeat | 45 | 92 | IPR001680 | GO:0005515 | |
Ssu2g1713 | 99 | PANTHER | SIMILARITY TO GTP-BINDING REGULATORY PROTEIN AND WD-REPEAT PROTEIN | 1 | 97 | - | - | |
Ssu2g1713 | 99 | SUPERFAMILY | WD40 repeat-like | 4 | 95 | IPR036322 | GO:0005515 | |
Ssu2g1713 | 99 | PANTHER | F-BOX AND WD40 DOMAIN PROTEIN | 1 | 97 | IPR045182 | - | |
Ssu2g1713 | 99 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 7 | 36 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g1713 | Ssu-Chr2 | 66631171 | 66631470 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g1713 | 3 | 62 | U-box Gene Family | AT2G33340 | 35.484 | 8.55e-07 | 43.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g1713 | - | - | vun:114174011 | 182.57 |